Gene Dd703_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3694 
Symbol 
ID8087060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4279605 
End bp4281641 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content57% 
IMG OID644837770 
Productdiguanylate cyclase/phosphodiesterase with MHYT sensor 
Protein accessionYP_002989273 
Protein GI242241092 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.323415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCG TTTCGTGGGA CACACTGATG ATTGCCATAT CCTGGTTAGT GGCGTTTATC 
GCCTCTTTTG TCGCACTGGA TATGGCTGGC AAGGTTGCCT ATTGCGAAAA ACGTGTTGCC
TTGTTCTGGC TGACAGCGGC TGGTACCGCC ATGGGCATGG GTATCTGGGC GATGCATTTT
ATCGGCATGT TGGCAATGCA CCTACCGATA ACGGTGAGCC ATAACCTCAA CCTCACCGCG
GTGTCCTTAC TGGTCGCCAT ATTTTCCTCT CTGATTTCAC TGCATCTCAC GGCTTCAGCC
CCCCAACTCA CACGCGCCAG ACTGGTGCTT GCCGCGCAGA CTTTCGGCGG CGGCGTAGTC
TGCATGCATT ACACCGGCGT GGCGGCAATC GCGGTTGCCG ACGGCATACA CTGGAACGGT
TGGTGGGTAG CGGTATCCAT ACCGGTAGCC TTTGTCGCTT CCGGCATAGC GATGTGGCTG
GCGTTTTCTC TGCGTCTACG GCAACGGTTA TTTGCCCGCC TTGCCGCAGC GCTGGTGATA
GGCGCTGCGA TCGCCGCCAT ACAGTACATC GGCTTCTCGC CGCTGGCGCA CTATCACGGA
GACAGCGTCA ATCAACGCGA GCTTTCCGTC TGGGTATCGG CAATATCGTT GTTGATCCTC
GGCGCCATGC TGGTGATTTC TATGCTTGAC GCCCAGTGGC GGGCGTCCCG CTTAACCGAC
AGTTTGAGGC AGGCCAACGA CCAGTTGGCA CGGCTCGCCA TGCACGATGC GCTGACCGGG
TTGCCCAACC GCATGCAACT GGAAAGGGAA CTGGAATCCT GCCTTCATCA CGCCCGCCAG
CACCGGCAAA CCTTTGCGTT GATGTATATG GATCTCGACG GTTTCAAAAT CGTCAATGAT
GCCTGGGGGC ACTACCTCGG CGATCAGTTA CTGGCTGGCG TGACGACGCG CCTGCGCGAG
TATCTGGGGC CAGGCATGAC CCTGGCACGG ATTGGCGGGG ACGAATTCGT GCTGCTGATG
CGAGACTGCG GCGAAGAGCA GGCTGCGGCG CTGGCCGACA AACTGGTACA GGCGATTGAG
CAGCCATTCC ACCAGTCGGG CTATACGCTG CGGGTCACGC TCAGCGTCGG CATCAGTCTG
TTTCCGCGAG ACGGTGCAAC ATCCCATGAC CTCAGGCTCA ACGCCGACAC CGCGATGTAC
AGCATCAAAC AGACCGGGCG CAACGGCTGG ATATTCTACA GCCCGTCGTT CAGCCACCAT
GGCAACCACC AGCCGGAGCT GTTGCAAGCG TTGCCAAAAG CGTTGGCGCT CAACCAATTC
CGTTTATGGT ATCAACCCAA ATATCGGCCG CCGAATGGCC CCATCCACGG CTTTGAAGCA
CTGATTCGCT GGCAGCATCC GCAAAAGGGC CTGCTACTGC CCGATAAGTT TCTGCCCATG
GCGGAAAAAA CCGGTCTGAT TATCGCCATC GGCGAATGGG TCATCAACGA GGCCTGTCGA
CAATTGCAGG TCTGGCACCA GCAAGGTCAG GTTCACTGGA CCGTAGCCAT TAACATTTCT
CCCGTCCAAT TCGACCAGCA TAATCTGGTC AGCGTGATTT CCGACGCACT GGCGAAATAC
CAGATTCCGC CGTACATGCT GACGCTGGAA ATCACCGAAA GCGTCGCCAT GCGCAATCTG
GAAAAAAGCC TGAATATCCT CCACGAGCTG GATCGACTGG GGGTCAAAGT CTCGATCGAC
GACTTTGGCA CCGGTTACTC CAATCTGCTT TCCCTGCGCC GGCTGCCGGC CAGAGAGTTG
AAGATCGACA GGACGTTCGT TAAGGACTTA CTGCTCCATA ATAAAAACGC CGTGGTAGTC
ACTACTATCA TCGAGATGGC CCGTTCCATG AACCTGGAAG TGGTTGCGGA AGGCGTGGAA
ACACCGGAGC AACAGGAATT GCTCACCCGC CTCGGCTGCT ATTCCTTGCA GGGATTCCTG
CTCGCGCCAC CGATGCCGCC AGACCATATC AACGAACAAC TGGCGCTCCC TCGCTAA
 
Protein sequence
MLIVSWDTLM IAISWLVAFI ASFVALDMAG KVAYCEKRVA LFWLTAAGTA MGMGIWAMHF 
IGMLAMHLPI TVSHNLNLTA VSLLVAIFSS LISLHLTASA PQLTRARLVL AAQTFGGGVV
CMHYTGVAAI AVADGIHWNG WWVAVSIPVA FVASGIAMWL AFSLRLRQRL FARLAAALVI
GAAIAAIQYI GFSPLAHYHG DSVNQRELSV WVSAISLLIL GAMLVISMLD AQWRASRLTD
SLRQANDQLA RLAMHDALTG LPNRMQLERE LESCLHHARQ HRQTFALMYM DLDGFKIVND
AWGHYLGDQL LAGVTTRLRE YLGPGMTLAR IGGDEFVLLM RDCGEEQAAA LADKLVQAIE
QPFHQSGYTL RVTLSVGISL FPRDGATSHD LRLNADTAMY SIKQTGRNGW IFYSPSFSHH
GNHQPELLQA LPKALALNQF RLWYQPKYRP PNGPIHGFEA LIRWQHPQKG LLLPDKFLPM
AEKTGLIIAI GEWVINEACR QLQVWHQQGQ VHWTVAINIS PVQFDQHNLV SVISDALAKY
QIPPYMLTLE ITESVAMRNL EKSLNILHEL DRLGVKVSID DFGTGYSNLL SLRRLPAREL
KIDRTFVKDL LLHNKNAVVV TTIIEMARSM NLEVVAEGVE TPEQQELLTR LGCYSLQGFL
LAPPMPPDHI NEQLALPR