| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3694 |
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| Symbol | |
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| ID | 8087060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4279605 |
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| End bp | 4281641 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644837770 |
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| Product | diguanylate cyclase/phosphodiesterase with MHYT sensor |
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| Protein accession | YP_002989273 |
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| Protein GI | 242241092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.323415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATCG TTTCGTGGGA CACACTGATG ATTGCCATAT CCTGGTTAGT GGCGTTTATC
GCCTCTTTTG TCGCACTGGA TATGGCTGGC AAGGTTGCCT ATTGCGAAAA ACGTGTTGCC
TTGTTCTGGC TGACAGCGGC TGGTACCGCC ATGGGCATGG GTATCTGGGC GATGCATTTT
ATCGGCATGT TGGCAATGCA CCTACCGATA ACGGTGAGCC ATAACCTCAA CCTCACCGCG
GTGTCCTTAC TGGTCGCCAT ATTTTCCTCT CTGATTTCAC TGCATCTCAC GGCTTCAGCC
CCCCAACTCA CACGCGCCAG ACTGGTGCTT GCCGCGCAGA CTTTCGGCGG CGGCGTAGTC
TGCATGCATT ACACCGGCGT GGCGGCAATC GCGGTTGCCG ACGGCATACA CTGGAACGGT
TGGTGGGTAG CGGTATCCAT ACCGGTAGCC TTTGTCGCTT CCGGCATAGC GATGTGGCTG
GCGTTTTCTC TGCGTCTACG GCAACGGTTA TTTGCCCGCC TTGCCGCAGC GCTGGTGATA
GGCGCTGCGA TCGCCGCCAT ACAGTACATC GGCTTCTCGC CGCTGGCGCA CTATCACGGA
GACAGCGTCA ATCAACGCGA GCTTTCCGTC TGGGTATCGG CAATATCGTT GTTGATCCTC
GGCGCCATGC TGGTGATTTC TATGCTTGAC GCCCAGTGGC GGGCGTCCCG CTTAACCGAC
AGTTTGAGGC AGGCCAACGA CCAGTTGGCA CGGCTCGCCA TGCACGATGC GCTGACCGGG
TTGCCCAACC GCATGCAACT GGAAAGGGAA CTGGAATCCT GCCTTCATCA CGCCCGCCAG
CACCGGCAAA CCTTTGCGTT GATGTATATG GATCTCGACG GTTTCAAAAT CGTCAATGAT
GCCTGGGGGC ACTACCTCGG CGATCAGTTA CTGGCTGGCG TGACGACGCG CCTGCGCGAG
TATCTGGGGC CAGGCATGAC CCTGGCACGG ATTGGCGGGG ACGAATTCGT GCTGCTGATG
CGAGACTGCG GCGAAGAGCA GGCTGCGGCG CTGGCCGACA AACTGGTACA GGCGATTGAG
CAGCCATTCC ACCAGTCGGG CTATACGCTG CGGGTCACGC TCAGCGTCGG CATCAGTCTG
TTTCCGCGAG ACGGTGCAAC ATCCCATGAC CTCAGGCTCA ACGCCGACAC CGCGATGTAC
AGCATCAAAC AGACCGGGCG CAACGGCTGG ATATTCTACA GCCCGTCGTT CAGCCACCAT
GGCAACCACC AGCCGGAGCT GTTGCAAGCG TTGCCAAAAG CGTTGGCGCT CAACCAATTC
CGTTTATGGT ATCAACCCAA ATATCGGCCG CCGAATGGCC CCATCCACGG CTTTGAAGCA
CTGATTCGCT GGCAGCATCC GCAAAAGGGC CTGCTACTGC CCGATAAGTT TCTGCCCATG
GCGGAAAAAA CCGGTCTGAT TATCGCCATC GGCGAATGGG TCATCAACGA GGCCTGTCGA
CAATTGCAGG TCTGGCACCA GCAAGGTCAG GTTCACTGGA CCGTAGCCAT TAACATTTCT
CCCGTCCAAT TCGACCAGCA TAATCTGGTC AGCGTGATTT CCGACGCACT GGCGAAATAC
CAGATTCCGC CGTACATGCT GACGCTGGAA ATCACCGAAA GCGTCGCCAT GCGCAATCTG
GAAAAAAGCC TGAATATCCT CCACGAGCTG GATCGACTGG GGGTCAAAGT CTCGATCGAC
GACTTTGGCA CCGGTTACTC CAATCTGCTT TCCCTGCGCC GGCTGCCGGC CAGAGAGTTG
AAGATCGACA GGACGTTCGT TAAGGACTTA CTGCTCCATA ATAAAAACGC CGTGGTAGTC
ACTACTATCA TCGAGATGGC CCGTTCCATG AACCTGGAAG TGGTTGCGGA AGGCGTGGAA
ACACCGGAGC AACAGGAATT GCTCACCCGC CTCGGCTGCT ATTCCTTGCA GGGATTCCTG
CTCGCGCCAC CGATGCCGCC AGACCATATC AACGAACAAC TGGCGCTCCC TCGCTAA
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| Protein sequence | MLIVSWDTLM IAISWLVAFI ASFVALDMAG KVAYCEKRVA LFWLTAAGTA MGMGIWAMHF
IGMLAMHLPI TVSHNLNLTA VSLLVAIFSS LISLHLTASA PQLTRARLVL AAQTFGGGVV
CMHYTGVAAI AVADGIHWNG WWVAVSIPVA FVASGIAMWL AFSLRLRQRL FARLAAALVI
GAAIAAIQYI GFSPLAHYHG DSVNQRELSV WVSAISLLIL GAMLVISMLD AQWRASRLTD
SLRQANDQLA RLAMHDALTG LPNRMQLERE LESCLHHARQ HRQTFALMYM DLDGFKIVND
AWGHYLGDQL LAGVTTRLRE YLGPGMTLAR IGGDEFVLLM RDCGEEQAAA LADKLVQAIE
QPFHQSGYTL RVTLSVGISL FPRDGATSHD LRLNADTAMY SIKQTGRNGW IFYSPSFSHH
GNHQPELLQA LPKALALNQF RLWYQPKYRP PNGPIHGFEA LIRWQHPQKG LLLPDKFLPM
AEKTGLIIAI GEWVINEACR QLQVWHQQGQ VHWTVAINIS PVQFDQHNLV SVISDALAKY
QIPPYMLTLE ITESVAMRNL EKSLNILHEL DRLGVKVSID DFGTGYSNLL SLRRLPAREL
KIDRTFVKDL LLHNKNAVVV TTIIEMARSM NLEVVAEGVE TPEQQELLTR LGCYSLQGFL
LAPPMPPDHI NEQLALPR
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