Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3694 |
Symbol | |
ID | 8087060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 4279605 |
End bp | 4281641 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644837770 |
Product | diguanylate cyclase/phosphodiesterase with MHYT sensor |
Protein accession | YP_002989273 |
Protein GI | 242241092 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.323415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATCG TTTCGTGGGA CACACTGATG ATTGCCATAT CCTGGTTAGT GGCGTTTATC GCCTCTTTTG TCGCACTGGA TATGGCTGGC AAGGTTGCCT ATTGCGAAAA ACGTGTTGCC TTGTTCTGGC TGACAGCGGC TGGTACCGCC ATGGGCATGG GTATCTGGGC GATGCATTTT ATCGGCATGT TGGCAATGCA CCTACCGATA ACGGTGAGCC ATAACCTCAA CCTCACCGCG GTGTCCTTAC TGGTCGCCAT ATTTTCCTCT CTGATTTCAC TGCATCTCAC GGCTTCAGCC CCCCAACTCA CACGCGCCAG ACTGGTGCTT GCCGCGCAGA CTTTCGGCGG CGGCGTAGTC TGCATGCATT ACACCGGCGT GGCGGCAATC GCGGTTGCCG ACGGCATACA CTGGAACGGT TGGTGGGTAG CGGTATCCAT ACCGGTAGCC TTTGTCGCTT CCGGCATAGC GATGTGGCTG GCGTTTTCTC TGCGTCTACG GCAACGGTTA TTTGCCCGCC TTGCCGCAGC GCTGGTGATA GGCGCTGCGA TCGCCGCCAT ACAGTACATC GGCTTCTCGC CGCTGGCGCA CTATCACGGA GACAGCGTCA ATCAACGCGA GCTTTCCGTC TGGGTATCGG CAATATCGTT GTTGATCCTC GGCGCCATGC TGGTGATTTC TATGCTTGAC GCCCAGTGGC GGGCGTCCCG CTTAACCGAC AGTTTGAGGC AGGCCAACGA CCAGTTGGCA CGGCTCGCCA TGCACGATGC GCTGACCGGG TTGCCCAACC GCATGCAACT GGAAAGGGAA CTGGAATCCT GCCTTCATCA CGCCCGCCAG CACCGGCAAA CCTTTGCGTT GATGTATATG GATCTCGACG GTTTCAAAAT CGTCAATGAT GCCTGGGGGC ACTACCTCGG CGATCAGTTA CTGGCTGGCG TGACGACGCG CCTGCGCGAG TATCTGGGGC CAGGCATGAC CCTGGCACGG ATTGGCGGGG ACGAATTCGT GCTGCTGATG CGAGACTGCG GCGAAGAGCA GGCTGCGGCG CTGGCCGACA AACTGGTACA GGCGATTGAG CAGCCATTCC ACCAGTCGGG CTATACGCTG CGGGTCACGC TCAGCGTCGG CATCAGTCTG TTTCCGCGAG ACGGTGCAAC ATCCCATGAC CTCAGGCTCA ACGCCGACAC CGCGATGTAC AGCATCAAAC AGACCGGGCG CAACGGCTGG ATATTCTACA GCCCGTCGTT CAGCCACCAT GGCAACCACC AGCCGGAGCT GTTGCAAGCG TTGCCAAAAG CGTTGGCGCT CAACCAATTC CGTTTATGGT ATCAACCCAA ATATCGGCCG CCGAATGGCC CCATCCACGG CTTTGAAGCA CTGATTCGCT GGCAGCATCC GCAAAAGGGC CTGCTACTGC CCGATAAGTT TCTGCCCATG GCGGAAAAAA CCGGTCTGAT TATCGCCATC GGCGAATGGG TCATCAACGA GGCCTGTCGA CAATTGCAGG TCTGGCACCA GCAAGGTCAG GTTCACTGGA CCGTAGCCAT TAACATTTCT CCCGTCCAAT TCGACCAGCA TAATCTGGTC AGCGTGATTT CCGACGCACT GGCGAAATAC CAGATTCCGC CGTACATGCT GACGCTGGAA ATCACCGAAA GCGTCGCCAT GCGCAATCTG GAAAAAAGCC TGAATATCCT CCACGAGCTG GATCGACTGG GGGTCAAAGT CTCGATCGAC GACTTTGGCA CCGGTTACTC CAATCTGCTT TCCCTGCGCC GGCTGCCGGC CAGAGAGTTG AAGATCGACA GGACGTTCGT TAAGGACTTA CTGCTCCATA ATAAAAACGC CGTGGTAGTC ACTACTATCA TCGAGATGGC CCGTTCCATG AACCTGGAAG TGGTTGCGGA AGGCGTGGAA ACACCGGAGC AACAGGAATT GCTCACCCGC CTCGGCTGCT ATTCCTTGCA GGGATTCCTG CTCGCGCCAC CGATGCCGCC AGACCATATC AACGAACAAC TGGCGCTCCC TCGCTAA
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Protein sequence | MLIVSWDTLM IAISWLVAFI ASFVALDMAG KVAYCEKRVA LFWLTAAGTA MGMGIWAMHF IGMLAMHLPI TVSHNLNLTA VSLLVAIFSS LISLHLTASA PQLTRARLVL AAQTFGGGVV CMHYTGVAAI AVADGIHWNG WWVAVSIPVA FVASGIAMWL AFSLRLRQRL FARLAAALVI GAAIAAIQYI GFSPLAHYHG DSVNQRELSV WVSAISLLIL GAMLVISMLD AQWRASRLTD SLRQANDQLA RLAMHDALTG LPNRMQLERE LESCLHHARQ HRQTFALMYM DLDGFKIVND AWGHYLGDQL LAGVTTRLRE YLGPGMTLAR IGGDEFVLLM RDCGEEQAAA LADKLVQAIE QPFHQSGYTL RVTLSVGISL FPRDGATSHD LRLNADTAMY SIKQTGRNGW IFYSPSFSHH GNHQPELLQA LPKALALNQF RLWYQPKYRP PNGPIHGFEA LIRWQHPQKG LLLPDKFLPM AEKTGLIIAI GEWVINEACR QLQVWHQQGQ VHWTVAINIS PVQFDQHNLV SVISDALAKY QIPPYMLTLE ITESVAMRNL EKSLNILHEL DRLGVKVSID DFGTGYSNLL SLRRLPAREL KIDRTFVKDL LLHNKNAVVV TTIIEMARSM NLEVVAEGVE TPEQQELLTR LGCYSLQGFL LAPPMPPDHI NEQLALPR
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