| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3688 |
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| Symbol | |
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| ID | 8087054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4274755 |
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| End bp | 4275720 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644837764 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_002989267 |
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| Protein GI | 242241086 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.51601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG GACAATTTCA GCTTCCTAAT CGTTTAATCG CCGCCCCGAT GGCCGGTGTC
AGCGATCGCC CTTTCAGGGT GCTTTGCCTC ACGATGGGTG CTGGGATGGC GGTATCCGAA
ATGCTCTCTT CCAATCCGGA AGTCTGGCGT TCGGATAAGT CGCGTCTGCG TATGGTGCAC
AGTGATGAAC CCGGTATCCG GGCCGTACAG ATCGCCGGCG GCGATCCAGC GGAGATGGCG
GCGGCAGCCA GTATCAATAT GGATAGTGGC GCGCAGATTA TCGACATCAA CATGGGATGC
CCGGCCAAAA AGGTAAACCG CAAGATGGCA GGTTCCGCCC TGCTGCAGTA TCCGGATCTG
GTGAAACGGA TCCTGACAGC GGTGGTGAAA TCGGTTTCGG TACCGGTGAC GCTGAAAATC
CGAACCGGTT GGGCACCAGA ACACCGTAAC TGTGTAGAAA TTGCCAGATT GGCTGAAGAC
TGTGGCATTC AGGCCCTCAC CATTCACGGC CGCACCCGTG CGTGCCTGTT CAATGGTGAA
GCGGAATACG ACAGCATTCG GACAGTTAAG CAGGCCGTTT CCATTCCGAT TATCGCGAAT
GGCGACATTA CTGACCCGCA CAAAGCCAGA GCGGTTCTTG ATTACACTGG GGCTGACGCC
CTGATGATAG GACGAGCCGC TCAGGGAAGA CCCTGGATCT TTCGGGAAAT CCAGCATTAT
CTGGACACAG GGGAGTTGCT TCCACCACTG CCGCTGGCAG AGGTCAAGCG CTTGTTGATC
GGGCACATAC GGGAATTGCA TGACTTTTAT GGTCCAGGCA AGGGATTCCG TATCGCACGT
AAGCACGTGT CCTGGTATCT CCAGGCCCAC GCCCCGAACG ACCAGTTTAG GCGCACATTC
AACGCCATTG AGGATGCCAG CGAGCAGCTG GAGGCGTTGG AGGCATATTT TGAAAATCTT
GCGTAA
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| Protein sequence | MRIGQFQLPN RLIAAPMAGV SDRPFRVLCL TMGAGMAVSE MLSSNPEVWR SDKSRLRMVH
SDEPGIRAVQ IAGGDPAEMA AAASINMDSG AQIIDINMGC PAKKVNRKMA GSALLQYPDL
VKRILTAVVK SVSVPVTLKI RTGWAPEHRN CVEIARLAED CGIQALTIHG RTRACLFNGE
AEYDSIRTVK QAVSIPIIAN GDITDPHKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLPPL PLAEVKRLLI GHIRELHDFY GPGKGFRIAR KHVSWYLQAH APNDQFRRTF
NAIEDASEQL EALEAYFENL A
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