Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3655 |
Symbol | |
ID | 8087021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 4240012 |
End bp | 4240620 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644837731 |
Product | lipopolysaccharide transport periplasmic protein LptA |
Protein accession | YP_002989234 |
Protein GI | 242241053 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA ACCTAAACAA TAATGTGTTG CACAGCATCC TGGTCGCCAG CGCCCTGTTC GCCGTCAGCC TTCCGGCATT GGCGCTGACC GGCGATACCG ATCAGCCCAT CCATATCGAT TCCGATCAGC AGGCGCTGGA TATGCAGAGC AACGTGGTCA CATTCACCGG CAACGTGATC GTGACCCAGG GTTCCATCAA GGTTCAGGCC GACAAAGTCG TGGTCACACG TCCGAACGGC CAGCAGGGCC ATGAAATCAT TGAAGGTTAC GGCAACCCGG CGACCTTTTA TCAGATGCAG GACAACGGTA AACCGGTAAA AGGACACGCG CAGAAAATGC GCTATGAACT GGACAAGCAG CTCGTCATTC TTACCGGCAA CGCTTATCTG GAACAGCTTG ACAGTAATGT CAAAGGCGAT CGCATTACCT ACCTGGTTCA ACAACAACAG ATGGAAGCCT TCAGCGACAA GGGTAAACGG GTAACTACCG TTCTGGTGCC GTCGCAATTG CAGGACAAGG GTACCCAGGC CAATCCGAAT GGCGTTAAGC CTGCCGCAAG TCAGAGCAAA CCCGGCGCCA GTCAGACCAA ACCCGCCAAA CAACAGTGA
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Protein sequence | MKSNLNNNVL HSILVASALF AVSLPALALT GDTDQPIHID SDQQALDMQS NVVTFTGNVI VTQGSIKVQA DKVVVTRPNG QQGHEIIEGY GNPATFYQMQ DNGKPVKGHA QKMRYELDKQ LVILTGNAYL EQLDSNVKGD RITYLVQQQQ MEAFSDKGKR VTTVLVPSQL QDKGTQANPN GVKPAASQSK PGASQTKPAK QQ
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