Gene Dd703_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3652 
Symbol 
ID8088961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4237876 
End bp4238862 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content58% 
IMG OID644837728 
ProductD-arabinose 5-phosphate isomerase 
Protein accessionYP_002989231 
Protein GI242241050 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATT TCAAGTTACA ACCCGGCTTT GATTTCCAGA CGGCAGGCCG TCAGGTTCTG 
TCCATCGAGC GCGATAGTCT GGCGCAGCTG GATCAGTATA TCGACGGTAA CTTCGCCCTG
GCCTGCGAAA AAATGTTCCA CTGTCGCGGC AAGGTCGTGG TCATGGGGAT GGGCAAATCA
GGCCATATCG GCTGCAAAAT GGCGGCGACG TTCGCCAGTA CCGGTACGCC ATCGTTTTTC
GTCCACCCTG GGGAAGCCAG CCACGGCGAT CTGGGCATGA TTGCCGCGCA GGACGTCGTC
ATCGCCATAT CCAACTCGGG TGAATCGCAC GAGATTCTGG CGCTGATCCC TGTGCTTAAA
CGTCTGCAGG TTTGTCTGAT TTGCATGACC GGCAACCCAG ACAGCACGAT GGCGAAAACT
GCGGATATCC ACCTTTGCGT TCACGTCGCT CAGGAAGCCT GCCCATTGGG GCTGGCGCCG
ACATCCAGCA CCACCGCCGC GCTGGTAATG GGCGATGCGC TGGCGGTGGC GTTATTGCAG
GCACGCGGCT TTACCGCCGA AGATTTCGCA TTATCCCATC CCGGCGGCGC GCTTGGCCGC
AAATTGCTGT TACGGGTGGA AGACATCATG CACTCCGGCG AAGAAATTCC TTGCGTGGAC
AGCCATGCTT CCCTGCGCGA CGCACTGTTG GAAATCACGC GCAAAAATCT GGGCATGACG
GCGATTTGCA ACGCAGACCG GAAAATCGAA GGGATTTTTA CCGACGGCGA CCTGCGCCGG
GTATTCGATA TGAATATCAA TCTGAACAAC GCCCGCATCA CCGACGTGAT GACGCGCGGC
GGTATCCGGG TGACGCCGCA TACACTGGCG GTCGATGCGC TGAATCTGAT GCAGTCCCGC
CACATTACCT CGTTGATGGT GGCGGACGAC GATCGTCTGC TTGGCATCAT CCATATGCAT
GATATGTTGC GCGCTGGCGT GGTGTGA
 
Protein sequence
MSHFKLQPGF DFQTAGRQVL SIERDSLAQL DQYIDGNFAL ACEKMFHCRG KVVVMGMGKS 
GHIGCKMAAT FASTGTPSFF VHPGEASHGD LGMIAAQDVV IAISNSGESH EILALIPVLK
RLQVCLICMT GNPDSTMAKT ADIHLCVHVA QEACPLGLAP TSSTTAALVM GDALAVALLQ
ARGFTAEDFA LSHPGGALGR KLLLRVEDIM HSGEEIPCVD SHASLRDALL EITRKNLGMT
AICNADRKIE GIFTDGDLRR VFDMNINLNN ARITDVMTRG GIRVTPHTLA VDALNLMQSR
HITSLMVADD DRLLGIIHMH DMLRAGVV