Gene Dd703_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3649 
Symbol 
ID8088958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4235006 
End bp4235788 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID644837725 
Productprotein of unknown function DUF140 
Protein accessionYP_002989228 
Protein GI242241047 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATTGC AGGCATTGGC GTCGTTGGGA CGCTCCGGCA TCAGCACCTG CGCCTCTTTT 
GGCCGGGCCG GGCTGATGTT GTTTAATGCG CTGGTCGGCA AGCCGGAGCC AGCTAAACAG
TGGCCGTTGC TGGCGCGGCA GCTTTATAGC GTCGGCGTGC AGTCGCTGCT GATTATCATC
GTTTCCGGCT GTTTTATCGG TATGGTGCTG GGGTTGCAAG GCTATATCGT GCTGACGACT
TACAGCGCGG AGGCCAGCTT GGGCATGATG GTGGCGCTGT CGTTATTACG CGAACTGGGG
CCGGTTGTGA CGGCGTTATT GTTTGCCGGT CGCGCCGGTT CCGCTCTGAC TGCGGAAATC
GGCCTGATGA AGGCCACCGA GCAGCTTTCC AGTATGGAGA TGATGGCGGT GGATCCGCTT
CGTCGCGTAG TCGCTCCCCG TTTCTGGGCC GGTTTTATCA GTATGCCTTT GCTGACTCTC
ATTTTCGTTG CGGTCGGCAT CTGGGGCGGC GCGCTGGTCG GCGTAGACTG GAAAGGTATC
GACAGCGGGT TTTTCTGGTC GGCGATGCAA GGGGCTGTGG AGTGGCGGCA CGATGTAATG
AACTGTGTGC TAAAGAGCCT GTTTTTCGCG ATGACCGTTA CCTGGATCGC CCTGTTCAAT
GGTTATGACG CCATCCCGAC GTCAGAAGGC ATCAGTCGTG CGACGACTCG TACCGTGGTG
CATTCTTCAC TGGCGGTACT GGGATTGGAT TTTGTGCTGA CAGCACTGAT GTTTGGGAAA
TGA
 
Protein sequence
MLLQALASLG RSGISTCASF GRAGLMLFNA LVGKPEPAKQ WPLLARQLYS VGVQSLLIII 
VSGCFIGMVL GLQGYIVLTT YSAEASLGMM VALSLLRELG PVVTALLFAG RAGSALTAEI
GLMKATEQLS SMEMMAVDPL RRVVAPRFWA GFISMPLLTL IFVAVGIWGG ALVGVDWKGI
DSGFFWSAMQ GAVEWRHDVM NCVLKSLFFA MTVTWIALFN GYDAIPTSEG ISRATTRTVV
HSSLAVLGLD FVLTALMFGK