Gene Dd703_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3618 
SymbolnudF 
ID8088926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4200156 
End bp4200791 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content56% 
IMG OID644837695 
ProductADP-ribose pyrophosphatase NudF 
Protein accessionYP_002989198 
Protein GI242241017 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTT CAGATGCGCA TCCGGGTACT TTTACCAAAG ATGATGTAGA AATTATTGCA 
CGTGAAACGC TCTATAAAGG TTTTTTTTCA CTGGAGCGCT ACCGTTTTCG CCACCGGCTG
TTCGATGGCG GCATGAGTGG GGAAGTCAGT CGTGAAATTC TGGAACGCGG ACACGCCGTT
GTACTGTTGC CCTATGATCC GGTGCGGGAC GAAGTGGTGT TGATTGAGCA GATTCGTATC
GCGGCTTACG ATACCAGCGC TACGCCCTGG TTGTTTGAAA TGGTGGCCGG CATGATCGAA
CCCGGCGAAA GCCTGGAGGA CGTGGCGCGC CGCGAAGCGC TGGAGGAAGC CGGGCTGGCG
GTGAAGCGCT GTCGCCCGGC GGTGAGTTAT CTGGCGAGCC CTGGCGGTAC CAGCGAAAGG
CTGGCGATTC TGGTGGGTGA AGTGGATGCC GGCGCCGCAA ACGGCATTCA TGGCCTGGCG
GAGGAGAATG AAGATATCCG CGTGCATGTG GTCAGCCGTG AGCAGAGTTA TCGGTGGGTC
GAAGAGGGGA TTATTGATAA CGCAGCCTCT GTCATTGCCT TGCAATGGTT GGCGTTGCAC
CATGAAGTAT TGAAAAAAGC GTGGGTGGAC GGATGA
 
Protein sequence
MASSDAHPGT FTKDDVEIIA RETLYKGFFS LERYRFRHRL FDGGMSGEVS REILERGHAV 
VLLPYDPVRD EVVLIEQIRI AAYDTSATPW LFEMVAGMIE PGESLEDVAR REALEEAGLA
VKRCRPAVSY LASPGGTSER LAILVGEVDA GAANGIHGLA EENEDIRVHV VSREQSYRWV
EEGIIDNAAS VIALQWLALH HEVLKKAWVD G