Gene Dd703_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3600 
Symbol 
ID8088908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp4180402 
End bp4181064 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID644837677 
ProductSNARE associated Golgi protein 
Protein accessionYP_002989180 
Protein GI242240999 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.451413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTG TTCATGAAAT TATTCAGGCA CTGTGGCGAC AGGATTTCAG TGCCTTGACC 
AATCCCCATG TGGTGTGGGT GATTTACGGC GTTCTTTTTA CCACCCTGTT TCTGGAGAAT 
GGCCTGCTGC CCGCATCTTT CCTGCCGGGC GATAGCCTGC TGTTATTGAC CGGCGCCATG 
ATAGCCAAGG GCGTGATGCA TTTTATGCCC ACGGTATTGC TGCTGACGCT GGCGGCCAGC 
CTCGGTTGCT GGCTGAGCTA TCTGCAGGGG CGTTGGCTGG GGGATACTCG TCTGGTAAAG 
AAATGGCTGC ACCAGTTGCC GGCGCACTAC CACCAACGCA CGCATAATCT GTTTCATCAT 
CACGGGCTCT CGGCGCTGCT GGTCGGGCGT TTTCTGGCTT TCGTCCGCAC CCTGCTGCCC 
ACCATCGCCG GCATCTCCGG GTTGAGCAAC TCCCGTTTCC AACTTTTCAA CTGGTTGAGC 
GGTTTTCTGT GGGTCTTCGG TATCGTCACG CTGGGTTACT CCATCAGCCA TATCCCGCTG 
GTGAAACGTC ATGAAGATCT GGTGATGACC GCACTTTGTA TCCTGCCGGT GATTTTACTG 
GCAAGCGGCC TGGTTGGCAT GCTGCTGGTG CTGTGGCGCA AAAAACGCAC CGTCGCCGGT 
TGA
 
Protein sequence
MSVVHEIIQA LWRQDFSALT NPHVVWVIYG VLFTTLFLEN GLLPASFLPG DSLLLLTGAM 
IAKGVMHFMP TVLLLTLAAS LGCWLSYLQG RWLGDTRLVK KWLHQLPAHY HQRTHNLFHH 
HGLSALLVGR FLAFVRTLLP TIAGISGLSN SRFQLFNWLS GFLWVFGIVT LGYSISHIPL 
VKRHEDLVMT ALCILPVILL ASGLVGMLLV LWRKKRTVAG