Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3591 |
Symbol | |
ID | 8088899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4167294 |
End bp | 4170032 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644837668 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_002989171 |
Protein GI | 242240990 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.355005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGAGG CAGTCCATGT GGAACTGTTA TCCGCACCCT ATTTTCATTA TTGGGGTAAA GCGCAGTCGT CTTCTGAAAA TGAAAACGGC GCGGCTTATC ATTTATTGCC TTATCACGGT CTGGATGTGG CGGCCTGCGG TTATTGGCTG GTGAAACATA ACCGTTTTCA TGCCCGCGAC CACCTACAGG CGTTGGGGTT GCATGAAGAA CACGCCGCAT TATGGTTGGC ATGGTTTTTG GCCTGGCACG ATATCGGTAA ATTTGCCCGC GGGTTCCAAC GGCTGTACCA AAACCCGGAT GCCCCGTTGG TGCAATCAAC GGGGCAGGTG TCTTCGGCGC GCCATGATTC GTTAGGTCTG TGGTTGTGGC GATACCAACT CTATGACCGC TGGCAGCAGG ATGCCGACTG GCTGCCGACG GTTTCCCGCG CCGATAAGTT TCATCATGTG ATGGATCTGT GGTTGCGGCT GATGTGCGGC CATCATGGCC AACCGCCGGT GGAAGACGAT AACGGCGCAC TGGCATTTCA CCCGGATGAC ATTCTGGCCG CTCAGGCCTA TCTCACCGAC CTGCGCACGG TGTTTCCTGA ATTAACCGCG TTTCCCGATA CATTTAGCGA TCGACGCTGG CGGGCATTAT TGCAACAGCA AAGCTGGCCG TTAGCCGGTT GTGTGGTACT GGCTGATTGG ATCGGCTCGT CACAGGCGGA TTTCCCTTAT CACGCCGGCC CCCTCGCCCT GGCGGACTAC TGGCATCAAC ATGCGTTACC GCAGGCGGAA AGCGCGGTGT TGCGTCTGCC TGCCGCCTGC CATGTCGCGC CGTTTCAGAG CATGAACGCG CTGTTTCCCT TTATTACTCA GCCAACGCCG TTGCAGCAAC AAGCCATGTC GGTGGATATC AACACGCCCG GCCCTCAGTT GTTTTTACTG GAGGACGTTA CCGGGGCGGG AAAAACCGAG GCCGCGTTGG TGTTGACGCA CCGATTGCTG AGCGCTGGGT TCGGCGATGG GGTGTACGTC GGTCTGCCGA CGATGGCGAC CGCCAACGCC ATGTACCGGC GGCTGGCGAC AGCGTACCGC ATGCTGTTTA ACGAGCCCGG CTCGCCATCG CTGATGTTGG CGCATGGCGC GCGCGACATG GTGACGGATT TTCAATTGTC GCTATGGGCG CCGGAACAGA CCGGGCCGAT GCGGTATGGC CCGGATGAAA ACAGCGCCAG CGCAGCGTGC AACCAGTGGT TTGCCGACTC ACGCAAAAAG GCGCTGCTGG CGGATGTCGG CGTCGGCACG CTCGATCAGG CGTTGATGGC GGTGATGCCA TTCCGGCATC AGTCGCTGCG TCTGTTGGGG TTTAACGGCA AAATTCTGCT GTTGGATGAA GTCCATGCTT ATGACGCCTA TACCAGCCGC CTGTTGGAGA ACCTGCTGGC TTTCCACGCC AGTCAGGGCG GCAGCGCGAT CATTCTTACC GCTACGCTGG CGGCATCGCA GCGGGAGCGG CTGGTGCAGG CGTTCTACCG CGGGGTACAA CAGCCGCCCG GCACGTTGGC GAAGCAGGCG GGTTATCCCT GGTTTACTCA AGTGAATGTG CAGGCGTTGC ATGAATGGCC GCTGGCAACC CGAGCCGAGG TTTGTCGTAC CGTGGCGGTG GACTGGTTAT CCCGCAGCGC CGAGGCCATT GCGCTGATTC GTCGGTCGGT GGCGGCCGGG CAATGCGTAT GCTGGATCCG CAATACGGTG GACGACGCGA TAGCCGCCTG GCGGCAACTG TGTCAGTGCG ATGAGATAGC GCCGGATGAC GTGCTGCTAT TCCACAGCCG GTTTGCGTTT TGCGACCGGC TGGCGATTGA GGATACGGCG GTCGAGCGCT TCGGTAAGCA CAGCGACGGC CGTGCCCGGC GCGGCAAGGT ATTGATTGCT ACGCAGGTGG TGGAACAGTC GCTGGATATT GATGTGGATG TGATGATAAG CGATCTCGCG CCGGTGGATT TGCTCATCCA GCGGGCCGGG CGTTTGCAAC GTCACATTCG CCGGGCCGAC GGTGGTTGTA AGCGGCCAGA CGACGCCGCG CCGCGGCAGG ATGACCGCCC CGCGCCGGTG TTGTGGGTGC TGGCGCCGGA ATGGCAACCG GACGCCGGGC GCGACTGGTT GGGTGCAGAG CTGCGCGGCA CCGGCGCGGT GTATTCGCAT CAGGCGGTGT TATGGCGCAC TCAGGCGATA TTGCGTGAAC GCGGTGCGCT ACGTATGCCG GAAGAGGCGC GTTTGCTGAT AGACAGTGTG TATGAGCAAC GTATTGCGGC ACCTGCCGCA TTAGAAGCGG GGGATTATCA GGCGGAAGGA AAACAGTTAG GCGATCGCAC CATCGCGGCG CAATCCTCGT TGACGTTCTC ATTGGGATAT TGCGCGGCGG CAGCCCAGCG TGGCTGGAGC GATGACGCCG AGCTGTTTAC TCGTGCCGGT GAAGACTCTC TGGATGTGTA TCTGGCCTGG CGCGCCGACC ACGACGACGC GCTACCACGG CCCTATGCCG GCGAGGGGGA ATTCGGCTGG GAAAAAAGCC GCCTGTCGGT ACGCCGGAAC TGGTGGCGGC AGCACGAAAA ACAGTGGCCG ACGCTACAGG GCGAGGCGCG GGAACGTTTT CGGCAACAAC TGCACCGCCC CGGCGCCGAG GTGCTGCTGC TGACGCCGGG CGAAGCGGCG GATTACTACC ATGCAGATCG GGGACTCGTT GCGCGGTAG
|
Protein sequence | MPEAVHVELL SAPYFHYWGK AQSSSENENG AAYHLLPYHG LDVAACGYWL VKHNRFHARD HLQALGLHEE HAALWLAWFL AWHDIGKFAR GFQRLYQNPD APLVQSTGQV SSARHDSLGL WLWRYQLYDR WQQDADWLPT VSRADKFHHV MDLWLRLMCG HHGQPPVEDD NGALAFHPDD ILAAQAYLTD LRTVFPELTA FPDTFSDRRW RALLQQQSWP LAGCVVLADW IGSSQADFPY HAGPLALADY WHQHALPQAE SAVLRLPAAC HVAPFQSMNA LFPFITQPTP LQQQAMSVDI NTPGPQLFLL EDVTGAGKTE AALVLTHRLL SAGFGDGVYV GLPTMATANA MYRRLATAYR MLFNEPGSPS LMLAHGARDM VTDFQLSLWA PEQTGPMRYG PDENSASAAC NQWFADSRKK ALLADVGVGT LDQALMAVMP FRHQSLRLLG FNGKILLLDE VHAYDAYTSR LLENLLAFHA SQGGSAIILT ATLAASQRER LVQAFYRGVQ QPPGTLAKQA GYPWFTQVNV QALHEWPLAT RAEVCRTVAV DWLSRSAEAI ALIRRSVAAG QCVCWIRNTV DDAIAAWRQL CQCDEIAPDD VLLFHSRFAF CDRLAIEDTA VERFGKHSDG RARRGKVLIA TQVVEQSLDI DVDVMISDLA PVDLLIQRAG RLQRHIRRAD GGCKRPDDAA PRQDDRPAPV LWVLAPEWQP DAGRDWLGAE LRGTGAVYSH QAVLWRTQAI LRERGALRMP EEARLLIDSV YEQRIAAPAA LEAGDYQAEG KQLGDRTIAA QSSLTFSLGY CAAAAQRGWS DDAELFTRAG EDSLDVYLAW RADHDDALPR PYAGEGEFGW EKSRLSVRRN WWRQHEKQWP TLQGEARERF RQQLHRPGAE VLLLTPGEAA DYYHADRGLV AR
|
| |