Gene Dd703_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3587 
Symbol 
ID8088895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4162706 
End bp4163443 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID644837664 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002989167 
Protein GI242240986 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAT ATCTGGTGTT TCAGCTCTAT GCGCCGCTGG CCTCTTGGGG GGAGCCGGCG 
GTAGGCGAAG TGCGTCATAC TTCGCCGGTG CCGAGCCGTT CAGCGTTGTT GGGATTGCTG
GCGGCAGCGC TGGGTATCCG GCGTGACGAA GAGGAACGGC TGGCGCAGTT TAACGCGCAC
TACCGTTTCG CCTTAAGGGC ATTGTCCCGC CGAGAGGGTT GGCTGCGGGA CTACCATACC
GTGCAGATGC CGCGTGAAGA GCGCAAACGG GTGCGTTATA CCCGGCGTGA TGAACTGTGC
TCCGACCCGG GGCAAGGGCT GGAAACGCTG CTGACCGCCC GTGAATACCG CTGCGATGCG
TATTACCACG TGGCGGTGAG CGCCACCGAC GGTGCGCCCG TCACGCTTTC GCGATTGGCT
GATGCCCTGC GAACCCCAGT GTTCCCGCTG TATCTCGGCC GTAAAAGTTG CCCGCCGGCG
TTGCCGCTGG CGCCGCATCT GTTGCACGGA TCATTGGCTG AGGTGTGGCA ACAGGTTAAC
GCTACGCCGT TGCTCAATGA ACCGGCGCTG GCGTTCATCA ACCAGCCGGA CGGCAGTTGC
TACTGGGAAG CGGGCGAAGA GGTTGAGGTG GAAGGCGCAG TTCTGGAGGT GGTGCGCGGC
GACCAGCCGG CCAGCCGTCG GCGCTGGCAG TTCACCACGC GGATACAGCG CCACGGCGTG
CTGAAAGGAG GTCGGTAA
 
Protein sequence
MTEYLVFQLY APLASWGEPA VGEVRHTSPV PSRSALLGLL AAALGIRRDE EERLAQFNAH 
YRFALRALSR REGWLRDYHT VQMPREERKR VRYTRRDELC SDPGQGLETL LTAREYRCDA
YYHVAVSATD GAPVTLSRLA DALRTPVFPL YLGRKSCPPA LPLAPHLLHG SLAEVWQQVN
ATPLLNEPAL AFINQPDGSC YWEAGEEVEV EGAVLEVVRG DQPASRRRWQ FTTRIQRHGV
LKGGR