| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3577 |
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| Symbol | |
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| ID | 8088885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4151237 |
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| End bp | 4151977 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644837654 |
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| Product | 20S proteasome A and B subunits |
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| Protein accession | YP_002989157 |
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| Protein GI | 242240976 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.852438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTACT GTGTGGCCAT GCGTCTGTCC GACGGGCTGG TTTTTGCTTC CGATTCCCGC
ACCAATGCCG GCGTCGATCA CATTGCAACC TTCCGGAAAC TTCATGTGTT CCAGCAGGAG
GGAGAACGGG TTCTGGTTAT CCAGTCCGCC GGCAACCTGG CCACCACCCA GAGCATTATC
AGTTTGCTGA GCGCCCGCAT TCAGGCCGGG CATAGCCCGA ACCTGATGCA GGTCGACACC
CTGTACGACG CCGCCACGCT GCTCGGCGAT ACTATCCGCG AAGTCATCCA CCGCGACAGT
CAGTCCCAGC AAAACGGCAG TACCACCAAT TTCGGCTGCA ACCTGTTGTT AGGCGGCCAG
ATCGGTAGTG AGTCCCCCCG GCTGTTCCAC ATTTATCCCG AAGGCAACTT CATCGAAGCT
ACGTCGGATA CCCCGTACTT CCAGATCGGC GAAAGCAAGT ACGGCAAACC GATTATCGAC
CGCGTACTGA CGATGAATAC CTCGCTGGAA CAGGCCATGT GTTGCGCGCT GATTTCCATC
GACTCCACGC TGCGCAGCAA CCTGTCTGTC GGCCTGCCGC TGGACGTGAT GATTTACCGT
ACCGGCAGTT TTGATAGCAG CGAGCAGCAC CGCATCACCG AAAACGATCC CTACTTCGCC
GCCATACGCA AAGCCTGGTC TGAAGGGTTG GTCAATATCT TCCGCCAGTT GCCGCCGTTT
CCGGCGCAGC GTCAGGCATA A
|
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| Protein sequence | MTYCVAMRLS DGLVFASDSR TNAGVDHIAT FRKLHVFQQE GERVLVIQSA GNLATTQSII
SLLSARIQAG HSPNLMQVDT LYDAATLLGD TIREVIHRDS QSQQNGSTTN FGCNLLLGGQ
IGSESPRLFH IYPEGNFIEA TSDTPYFQIG ESKYGKPIID RVLTMNTSLE QAMCCALISI
DSTLRSNLSV GLPLDVMIYR TGSFDSSEQH RITENDPYFA AIRKAWSEGL VNIFRQLPPF
PAQRQA
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