Gene Dd703_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3554 
Symbol 
ID8089509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4124824 
End bp4126083 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content52% 
IMG OID644837630 
Productintegrase family protein 
Protein accessionYP_002989134 
Protein GI242240953 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA ATGCCCGTCA GGTCGAGACT GCCAAGCCCA AAGAGAAAAC CTACAAGATG 
GCGGATGGGG GCGGCTTATA CCTTGAGATT ACCCCACGCG GTTCAAAATA CTGGCGCATG
AAGTATCGGC GTCCAGATGA CAAGAAAGAA GACCGGCTGG CTTTTGGTGT TTGGCCGACA
GTCACCCTGG CTGAGGCTCG TGCTAAACGT GATGAAGCTA AAAAGCTGCT GGTGCAAGGT
ATTGACCCAA AGGCTGAACA AAAAGAGGCA CAGGCTGAAA CTGCGGGGGC GTATACCTTT
GAGACTATCG CCCGGCAGTG GCACGCCAGC AACAAGCGCT GGGGCGATTA TCACCGTGCA
CGGGTGATGC GTTATCTTGA ACTGTACATT TTTCCGCATA TTGGCACGGC AGATATCCGT
AAACTCAAAA CCAGCCATCT GTTAGCACCG ATAAAAGCGG TGGATGCCAG CGGCAAGCAC
GATGTAGCAC AACGCCTGCA ACAGCGTGTT ACGGCGATTA TGCGCTATGC CGTGCAGAAC
GATTATATTG ACTCTAACCC GGCCAGTGAC ATGAGCGGGG CATTAACGAC GACGAAAGCA
CGGCACTATC CCGCCTTGCC GCCGGAACGT CTCCATGAGT TCCTGTCACG GCTTGCGGCT
TATCGTGGCC GCCAGATGAC ACGTATTGCA GTCGAACTCA CGTTGCTGAC GTTTGTACGT
TCCAGCGAGC TTCGTTTTGC CCAATGGCGA GAGTTTGATT TTGATAAGGC TTACTGGCGG
GTTCCAGCAC AGCGGGAAGC GATCAAAGGC GTGCGTTACT CCTATCGTGG CATGAAGATG
AAGGAAGAAC ACATCGTGCC GCTCAGTCGT CAGGCTGTAG CGCTGCTGGA GCAGTTAAAG
GCAATTAGCG GTGACAACAA ATGCCTTTTC CCGGGTGATC ATGACCCGGA AAAAGTGATG
AGCGAAAACA CGGTCAATAA CGCGCTACGA GCGATGGGTT ATGACACGCA AACCGAAGTT
TGCGGACACG GTTTCAGAAC GATGGCGCGA GGCGCGTTAG GGGAATCTGG CCTGTGGAGT
GACGACGCGA TAGAGCGTCA GTTAAGTCAT TCTGAGCGGA ACAATGTCCG GGCGGCTTAC
ACCCACACTT CTGAGTATCT GGATGAACGT CGGTTGATGG TGCAGTGGTG GGCGGATTAT
TTGGATGCTA ATAGAAAAGA AACAACAGCA CCCTATGATT ATGCTAATAG ATTTAGATAA
 
Protein sequence
MKLNARQVET AKPKEKTYKM ADGGGLYLEI TPRGSKYWRM KYRRPDDKKE DRLAFGVWPT 
VTLAEARAKR DEAKKLLVQG IDPKAEQKEA QAETAGAYTF ETIARQWHAS NKRWGDYHRA
RVMRYLELYI FPHIGTADIR KLKTSHLLAP IKAVDASGKH DVAQRLQQRV TAIMRYAVQN
DYIDSNPASD MSGALTTTKA RHYPALPPER LHEFLSRLAA YRGRQMTRIA VELTLLTFVR
SSELRFAQWR EFDFDKAYWR VPAQREAIKG VRYSYRGMKM KEEHIVPLSR QAVALLEQLK
AISGDNKCLF PGDHDPEKVM SENTVNNALR AMGYDTQTEV CGHGFRTMAR GALGESGLWS
DDAIERQLSH SERNNVRAAY THTSEYLDER RLMVQWWADY LDANRKETTA PYDYANRFR