| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3534 |
|---|
| Symbol | |
|---|
| ID | 8089489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4107678 |
|---|
| End bp | 4108211 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644837610 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002989114 |
|---|
| Protein GI | 242240933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00335662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA ATTATGCGCT AGGCGTCATG CTGCTTGCCG GCGTCGGGCT ATCAGGGTGC
GTCTCGACGC CCACCGCGCC ATCGGTGATG TCGTTACCCG GCAGCGGTAA AAGTTATGAG
CAGTTCCGCG CCGACGATGC CGTGTGTAAA AACACCGCGT ATCGAGCGGT GAATGGCGAA
GCCAGTACGG CCAACAATCA GAGTGTCACG ACGGCCGTCG CCGGCGCGGC TATCGGTACT
GCGACGGGGG CGCTGCTGGG TGCGGCCGGC GGTGGCCCGA GAGGATCGTC CAACGGCGCA
GCGGTAGGTG CGGCGAGCGG TCTGCTGGTC GGGTCGGCCA TCGCCAGCGG CAATGGCGCC
CGTACACAGG GGGCATTGCA GGATCAGTTT GATGTGGTTT ATATGCAGTG CATGTATGCG
AAGGGCGAAA AAATCCCGCA GGCGTACTCT TGGGCGCAGC AGGCTGATGT TTCGGAAGTG
CCGCCGGATT ACTCTCCTGG CGCATCGGCG GTGCCGCCGG ATTATCACCC CTGA
|
|---|
| Protein sequence | MKRNYALGVM LLAGVGLSGC VSTPTAPSVM SLPGSGKSYE QFRADDAVCK NTAYRAVNGE
ASTANNQSVT TAVAGAAIGT ATGALLGAAG GGPRGSSNGA AVGAASGLLV GSAIASGNGA
RTQGALQDQF DVVYMQCMYA KGEKIPQAYS WAQQADVSEV PPDYSPGASA VPPDYHP
|
|---|
| |