Gene Dd703_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3526 
Symbol 
ID8089481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4100255 
End bp4101190 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content58% 
IMG OID644837603 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002989107 
Protein GI242240926 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC GTTCAATGCT GTTAACTGCT GCCATCACCA GTGCCTTATC GCTGACCGCC 
CATGCGGCGG AAAAAGGCAC CATCATGATT CTGGTCAATT CACTGGATAA CCCGTACTAC
GCCTCGGAAG CCAAAGGCGC GGACAAGAAA GCGCAGGAGC TGGGTTACAA AACCACGGTG
CTTTCCCACG GTGAGGACGT GAAGAAACAG AGCGAGCTTA TCGATGCGGC TATCGGTAAG
AAAGTTCAGG GCATCGTATT GGATAACGCC GACTCCACCG CCAGCGTGGC GGCGATCAAA
AAAGCGAAGG CGGCGGGGAT CCCGGTGGTG TTGATCAACC GCGAAATTCC GGTGGATGAC
GTCGCGCTGG TACAGATCAC CCACAACAAC TTCCAGGCGG GCTCCGACGT CGCCAACGTG
TTCGTCGAGA AAATGGGCGA AAAAGGCAAG TATGCCGAAT TGACCTGTAG CCTGGCGGAC
AACAACTGCG TGACCCGTTC CAAATCCTTC CATCAGGTGT TGGATCAGTA CCCCGGCATG
GCGAGCATCG CCCGTCAGGA CGCCAAAGGT ACGCTGATCG ACGGTAAACG CATCATGGAC
AGCATTCTGC AGGCGCACCC GGACGTGAAA GGGGTGATCT GCGGTAACGG CCCGGTGGCG
CTGGGCGCCA TCGCCGCGCT GAAAGCCGCC GGCCGTAACG ATGTGGTGGT GGTCGGCATC
GACGGCAGCA ACGACGAGCG CGACGCGGTG AAAGAAGGAT CGCTGAAAGC CACCGTGATG
CTGCAGGCCC AGGCCATCGC CGCCCAAGGC GTGACCGATC TCGACAACTT CATCCAGAAA
GGCGCGAAAC CCGCCAAACA GCGCGTCATG TTCCGCGGCA TCCTGATCCA ACAGGATAAC
GCGAGCAAGG TGCAAGACTT CAACTTCAAA TCCTGA
 
Protein sequence
MKLRSMLLTA AITSALSLTA HAAEKGTIMI LVNSLDNPYY ASEAKGADKK AQELGYKTTV 
LSHGEDVKKQ SELIDAAIGK KVQGIVLDNA DSTASVAAIK KAKAAGIPVV LINREIPVDD
VALVQITHNN FQAGSDVANV FVEKMGEKGK YAELTCSLAD NNCVTRSKSF HQVLDQYPGM
ASIARQDAKG TLIDGKRIMD SILQAHPDVK GVICGNGPVA LGAIAALKAA GRNDVVVVGI
DGSNDERDAV KEGSLKATVM LQAQAIAAQG VTDLDNFIQK GAKPAKQRVM FRGILIQQDN
ASKVQDFNFK S