Gene Dd703_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3513 
Symbol 
ID8089468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4086496 
End bp4087380 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID644837590 
Productpolysaccharide deacetylase 
Protein accessionYP_002989094 
Protein GI242240913 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.206647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGT TTGCCCACTG GCCTGCGCCC TACCGCTGTG CGGTGGTCGT GACCATCGAC 
TATCACGATG TCCACGGCAT CCTCACCCAG ACACCCGCGG TGGCCGGCCG TGAAAAGACG
CTGTCGGTCT GGCGTTACGG CACTACGCGC GGTGTGGATC GTTTGCTGGC GCTGTTGGCG
CGCAAACAGG TCTGCGCCAG CTGGTGTCTG CCGGCTATCG TCGCCGAGGA AAACCGCGAC
CTGTTCGCGC GCATCGTCGC CGGCGGCCAT GAGATCGCCT GTTCGGGCTA TCGCCATCAG
GATTTTGACG CCATCACGTT GGCGGAGCAG GTCGCCAGCC TGCAACAAGG GTGCGACGCG
CTGGAGACGC TGAGCGGTAC GCGCCCGGTC GGCTTCCGGT TGCCTGCCGG GCAGTGGAAA
CCGGGGTTCG TCGAGGCGAT GGCGCAGGCG GGGATCCGTT GGTCGTCCAG TTGGCGCGGC
GACGATCTGC CCTATTTCCA TCAGGAGGCG CCGCTGGTGG AGCTACCGCT GCACTACGAG
TTGGAGGACG ACCCCTATTT CGCCTTCAAT CTCAGTCCGG CGGTGCCGCC GGGGCAATCC
CGTATTGCGT CTTATGCCCA TACGCTGGAA AACATGAAGC TCGATTTCAG CGGTTTTTAC
CGCTTCGGTG GTTGCTATGT GTTGCGGCTG CACCCGGAAA TCATCGGCAC GGCGGGCCGC
ATCGGGCTGT TGGATGCGCT GCTGGATTTC ATTTGCGGCC ATGACAACGT TTGGTTGGCG
ACGGCGGGCG AGGTGGCGGC ATGGTGGCAA ACGCAGCCGG CCAATGCACC GGAGCATCCG
GCGGCGATTT ATCATCAGCA TGTGAATACG CAGGTACCGT CATGA
 
Protein sequence
MSGFAHWPAP YRCAVVVTID YHDVHGILTQ TPAVAGREKT LSVWRYGTTR GVDRLLALLA 
RKQVCASWCL PAIVAEENRD LFARIVAGGH EIACSGYRHQ DFDAITLAEQ VASLQQGCDA
LETLSGTRPV GFRLPAGQWK PGFVEAMAQA GIRWSSSWRG DDLPYFHQEA PLVELPLHYE
LEDDPYFAFN LSPAVPPGQS RIASYAHTLE NMKLDFSGFY RFGGCYVLRL HPEIIGTAGR
IGLLDALLDF ICGHDNVWLA TAGEVAAWWQ TQPANAPEHP AAIYHQHVNT QVPS