Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3504 |
Symbol | |
ID | 8089459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4076777 |
End bp | 4077796 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644837581 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002989085 |
Protein GI | 242240904 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.307632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCTG CTGACAACAA TCCACACGAA TACCCGCACG AGATCGTGCT GGACGTGAAA AACCTGCGTG TTGATTTGCC GACGCCGCGC GGCACGCTGC ATGCGGTGCG CGGCATCGAT TTCTCGGTAC GGCGCGGCGA GATGCTGTGT CTGGTGGGCG AGTCCGGCTG CGGCAAGTCG ATGACGTCGC TGGCGCTGAT GGACTTGCTG CCGCGCCGGG CGGTACGCAC GGCGGACTAT ATCCGTTTCA AAGGGCAGGA CTTGCAGTCA TTACGTCCGA AACAGATGTC GATGCTGCGC GGCAACCAGA TAGCGATGAT TTTTCAGGAG CCGATGACCT CGCTCAACCC GTCGTTCACG CTGGGAGACC AACTGTGCGA AACCCTGATG GCGCACCGGC GTGTGTCCTA CGCCGAGGCG CGGGAGCGGG CGGTGTACCT GATGGAGCGC GTCGGCATTC CGCTGGCGAC GGAGCGTTTG AGGCAGTATC CGCACCAGCT GTCCGGCGGC CTGCGCCAGC GCATCATCAT CGCCATGGCG CTGATGTGCG GCCCGGAGCT GATTATCGCC GATGAACCCA CCACCGCGCT GGATGTCACT ATTCAGGCGC AGATTTTACG CATGCTGCGT GAGTTGCAGC AGGAACTGGG CACGGCGGTG ATTTTCATTA CCCACGATCT GGGCGTGGTG GCGCGTATCG CCGACCGCGT GGCGGTGATG TACGCCGGCC AGGTGGTGGA AAACGCGCCG GTACGGGAAC TGTTTCACCA GCCGCAGCAC CCTTATACCC GCGGCCTGCT GGCCTGCATC CCGGTGCAGG GCAAAACCGT GCCGGGCGAA CCGTTGCAGG CAATCCCCGG CATGGTGCCG AGCCTGGTCG GGCCGCAGCA GGGCTGCGCG TTCCGTAATC GTTGCGGCGA ATGTCATGAG CGTTGTCTGG TGGATGTCGA CTGGCGGGCG GTGTCGCCAC TGCATGCGGT GCGTTGTGTA CAGGCCCAGG CTACGGAGGT GTTGGTATGA
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Protein sequence | MHSADNNPHE YPHEIVLDVK NLRVDLPTPR GTLHAVRGID FSVRRGEMLC LVGESGCGKS MTSLALMDLL PRRAVRTADY IRFKGQDLQS LRPKQMSMLR GNQIAMIFQE PMTSLNPSFT LGDQLCETLM AHRRVSYAEA RERAVYLMER VGIPLATERL RQYPHQLSGG LRQRIIIAMA LMCGPELIIA DEPTTALDVT IQAQILRMLR ELQQELGTAV IFITHDLGVV ARIADRVAVM YAGQVVENAP VRELFHQPQH PYTRGLLACI PVQGKTVPGE PLQAIPGMVP SLVGPQQGCA FRNRCGECHE RCLVDVDWRA VSPLHAVRCV QAQATEVLV
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