Gene Dd703_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3504 
Symbol 
ID8089459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4076777 
End bp4077796 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content63% 
IMG OID644837581 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002989085 
Protein GI242240904 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.307632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCTG CTGACAACAA TCCACACGAA TACCCGCACG AGATCGTGCT GGACGTGAAA 
AACCTGCGTG TTGATTTGCC GACGCCGCGC GGCACGCTGC ATGCGGTGCG CGGCATCGAT
TTCTCGGTAC GGCGCGGCGA GATGCTGTGT CTGGTGGGCG AGTCCGGCTG CGGCAAGTCG
ATGACGTCGC TGGCGCTGAT GGACTTGCTG CCGCGCCGGG CGGTACGCAC GGCGGACTAT
ATCCGTTTCA AAGGGCAGGA CTTGCAGTCA TTACGTCCGA AACAGATGTC GATGCTGCGC
GGCAACCAGA TAGCGATGAT TTTTCAGGAG CCGATGACCT CGCTCAACCC GTCGTTCACG
CTGGGAGACC AACTGTGCGA AACCCTGATG GCGCACCGGC GTGTGTCCTA CGCCGAGGCG
CGGGAGCGGG CGGTGTACCT GATGGAGCGC GTCGGCATTC CGCTGGCGAC GGAGCGTTTG
AGGCAGTATC CGCACCAGCT GTCCGGCGGC CTGCGCCAGC GCATCATCAT CGCCATGGCG
CTGATGTGCG GCCCGGAGCT GATTATCGCC GATGAACCCA CCACCGCGCT GGATGTCACT
ATTCAGGCGC AGATTTTACG CATGCTGCGT GAGTTGCAGC AGGAACTGGG CACGGCGGTG
ATTTTCATTA CCCACGATCT GGGCGTGGTG GCGCGTATCG CCGACCGCGT GGCGGTGATG
TACGCCGGCC AGGTGGTGGA AAACGCGCCG GTACGGGAAC TGTTTCACCA GCCGCAGCAC
CCTTATACCC GCGGCCTGCT GGCCTGCATC CCGGTGCAGG GCAAAACCGT GCCGGGCGAA
CCGTTGCAGG CAATCCCCGG CATGGTGCCG AGCCTGGTCG GGCCGCAGCA GGGCTGCGCG
TTCCGTAATC GTTGCGGCGA ATGTCATGAG CGTTGTCTGG TGGATGTCGA CTGGCGGGCG
GTGTCGCCAC TGCATGCGGT GCGTTGTGTA CAGGCCCAGG CTACGGAGGT GTTGGTATGA
 
Protein sequence
MHSADNNPHE YPHEIVLDVK NLRVDLPTPR GTLHAVRGID FSVRRGEMLC LVGESGCGKS 
MTSLALMDLL PRRAVRTADY IRFKGQDLQS LRPKQMSMLR GNQIAMIFQE PMTSLNPSFT
LGDQLCETLM AHRRVSYAEA RERAVYLMER VGIPLATERL RQYPHQLSGG LRQRIIIAMA
LMCGPELIIA DEPTTALDVT IQAQILRMLR ELQQELGTAV IFITHDLGVV ARIADRVAVM
YAGQVVENAP VRELFHQPQH PYTRGLLACI PVQGKTVPGE PLQAIPGMVP SLVGPQQGCA
FRNRCGECHE RCLVDVDWRA VSPLHAVRCV QAQATEVLV