| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3487 |
|---|
| Symbol | |
|---|
| ID | 8089442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4059479 |
|---|
| End bp | 4060303 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644837565 |
|---|
| Product | rhamnulose-1-phosphate aldolase |
|---|
| Protein accession | YP_002989069 |
|---|
| Protein GI | 242240888 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCA TTCTCTCTTC CTGGTTCGTC CAGGGCATGG TCAAGGCCAC CGGCGACATG
TGGCTCAAAG GCTGGGACGA ACGCAACGGC GGCAACATCA GCCTGCGTCT GACGACCGAA
GACATCACCC CCTACGAAAG CGATTTTTAT CCCCAGCCGC GCCATGAAGC GCTGTCGCAG
CCAATGCCCG AGCTGGCTAA TGGCTGGTTT ATCGTCACCG GCTCCGGCAA ATTCTTCCGC
AATGTGCCGC TGGATCCAGC GGAAAACCTG GTACTGCTGC AAGTGGATGC AAACGGCGCC
GGCTATCGCA TTTTCTGGGG GCTGACCGCC GGCGGCCTGC CCACCTCCGA ACTGGCGGCG
CACTTTCAGT CGCACATTGT GCGCATCGGG GTCAGCGGCG GGCGCGATCG GGTCATCATG
CACTGCCACG CCACCAATTT GATTGCCCTC AGCTACGTGC TGGAACTGAC CAGCGCTACG
TTTACCCGCG AACTGTGGGA AGGCAGCACC GAGTGTCTGG TGGTCTTCCC TGACGGCGTC
GGCATCGTGC CCTGGATGGT GCCCGGCACC GACGCCATTG GCACCGCCAC CGCCGAACAG
ATGCATCATC ACTCGCTAGT GCTGTGGCCG TTCCATGGTA TTTTCGGTAC CGGCCCGTCA
CTGGATGATG CTTTCGGCCT GATCGATACC GCCGAGAAAT CCGCTGAAAT CATGGTGAAA
GTCCGCGCGA TGGGGGGGAA AAAGCAGACC ATCAGCACCG AAGAACTGAT AGCACTGGGC
ACACGCTTCG GCGTCAGCCC GATGGCGTCA GCGCTAAAAC AGTAA
|
|---|
| Protein sequence | MQSILSSWFV QGMVKATGDM WLKGWDERNG GNISLRLTTE DITPYESDFY PQPRHEALSQ
PMPELANGWF IVTGSGKFFR NVPLDPAENL VLLQVDANGA GYRIFWGLTA GGLPTSELAA
HFQSHIVRIG VSGGRDRVIM HCHATNLIAL SYVLELTSAT FTRELWEGST ECLVVFPDGV
GIVPWMVPGT DAIGTATAEQ MHHHSLVLWP FHGIFGTGPS LDDAFGLIDT AEKSAEIMVK
VRAMGGKKQT ISTEELIALG TRFGVSPMAS ALKQ
|
|---|
| |