Gene Dd703_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3480 
Symbol 
ID8089435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4051117 
End bp4052082 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID644837558 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002989062 
Protein GI242240881 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCTG GATTAAACCG TAATTTGGCC GTAACGGCGC TACAACGTCT GTTCACCATC 
GTGGCTGTGC TCTGGGGCGC GGCCACCCTG ACGTTTATCG CCGTCAAAAT GATCCCCGGC
GACCCGGTCG CCATCCTCAG CGGCGGTGAA AACGTGGTGG ATGAAGCCTA TCGAATGGCG
CTGATCCATC AATTCGGGCT GGATCAGCCG CTGTGGATGC AGTACCTGCG CTATTGCCAA
CAGGCATTGC AGGGCGATTT CGGCATCAGC TACCAGTATC GCCAGCCGGT ACTGGATGTG
GTCGGCGAGG CCATGCGTGA AACGGTAAAA CTGGCGCTCA GCGCGTTGTT GCTGGCGTTG
CTGCTGGCGA CGCTCAACGC GCTGCTCACC GCCGGTCGCC ACTATCGGCT GCGGGCGCTA
TTGTCCTGGC TGGAGCTGAC GCTGCTCAGT ACGCCGGTCT ATTGGATCGG CATTGTGCTG
TTGAGCCTGT TCAGCTTCCG CCTGCAATGG TTCCCGGTCA CTGGCAATGA CGGCATCGCC
TCGCTGGTAT TGCCGGTGAT CACCTTAAGC CTGCCGATCG CGGCGTTGTT GAGCCAGGTA
CTGCGCGATG GGCTGGAAGA AGCGCTATCG CAGCCGTTCG CGCTGACGGT GCGAACCCGC
GGCGTCAGTG AAACCTGGTT GCGGTTCAGA CATGGATTAC GTCACGGCGC GCTGGCTGCC
GCCACGCTGA CCGGCACGTT GCTGGCCAGC GTGTTGAGCG GCTCCGTCTT GACAGAAACC
GTGTTTGGCC GCGCCGGCAT CGGGCAGGTC ACGTTACATG CGATTGAAAG CCGCGACATG
CCGCTGGTGC TGGGGCTGGT GATGCTCTCC GCCCTGTTGT TTGTGGTGAT TAACCTGCTG
GTGGATGCCC TGTATCTGGT CATCGATCCG CGTCTGAGAA AGAAGGCGAA CGCTCATGAG
CAGTGA
 
Protein sequence
MMSGLNRNLA VTALQRLFTI VAVLWGAATL TFIAVKMIPG DPVAILSGGE NVVDEAYRMA 
LIHQFGLDQP LWMQYLRYCQ QALQGDFGIS YQYRQPVLDV VGEAMRETVK LALSALLLAL
LLATLNALLT AGRHYRLRAL LSWLELTLLS TPVYWIGIVL LSLFSFRLQW FPVTGNDGIA
SLVLPVITLS LPIAALLSQV LRDGLEEALS QPFALTVRTR GVSETWLRFR HGLRHGALAA
ATLTGTLLAS VLSGSVLTET VFGRAGIGQV TLHAIESRDM PLVLGLVMLS ALLFVVINLL
VDALYLVIDP RLRKKANAHE Q