| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3467 |
|---|
| Symbol | |
|---|
| ID | 8089421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4037120 |
|---|
| End bp | 4037893 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644837545 |
|---|
| Product | Trans-aconitate 2-methyltransferase |
|---|
| Protein accession | YP_002989049 |
|---|
| Protein GI | 242240868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACT GGAATCCCGA ACTGTATCTG CGTTTCGCCA GCGAGCGCAC ACGCCCGGCT
CTCGAACTCG TCTCCCGTAT CATTCATCCC GATATTATTC GCATCACCGA TCTGGGCTGC
GGCCCCGGCA ATAGCACCGA ACTGCTGCGG CAGGCCTGGC CGCATGCCGA AATCACCGGT
CTGGATAACT CGGCCGCCAT GCTCGAACAG GCTCACCGGC GTTTGCCGGG CTGCACCTTC
CAACTGGCAG ACATTGCACA CTGGCAGCCG GAAAAACCGC AGGATTTGAT CTTTGCCAAC
GCATCGCTGC AATGGCTCGA CGATCACGAC CGGTTGTTTC CCCACCTGCT GCGCCAGCTC
GCGCCGGGCG GCGTACTGGC GGTACAGATG CCGGATACGC TGGAACAGCC TACGCACCAA
TTAATGCGCC AGACTGCGCT GGCCGGGCCG TGGCGGGACA CATTCGCCGA TGTCGATCGC
ATCCGCCAAC CGTTGTCTGA CCCGGAATAT TATTACGATC TGCTCGTCGG TAACGGATGC
GAAGCCGATA TCTGGCGCAC GACTTACTAT CACGTCATGA GCGGCCCATT GGCGATTATT
GAATGGTTGA AAGGTACGGG ATTACGGCCA TTCCTGACCC GATTAGATAA AGAAGAACAG
CAGGCGTTTT TGCAACATTA TCAAGTACAT CTACAACAGG CTTATCCCGC GCGTCGGGAT
GGCAGCTGCC TGCTGGCCTA CCCCCGGTTA TTCCTGACGG CGCGCAAGGG CTAG
|
|---|
| Protein sequence | MQDWNPELYL RFASERTRPA LELVSRIIHP DIIRITDLGC GPGNSTELLR QAWPHAEITG
LDNSAAMLEQ AHRRLPGCTF QLADIAHWQP EKPQDLIFAN ASLQWLDDHD RLFPHLLRQL
APGGVLAVQM PDTLEQPTHQ LMRQTALAGP WRDTFADVDR IRQPLSDPEY YYDLLVGNGC
EADIWRTTYY HVMSGPLAII EWLKGTGLRP FLTRLDKEEQ QAFLQHYQVH LQQAYPARRD
GSCLLAYPRL FLTARKG
|
|---|
| |