Gene Dd703_3439 details

Gene Information

• Locus tag: Dd703_3439
• ID: 8089393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4008420
• End bp: 4008974
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644837517
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_002989021
• Protein GI: 242240840
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGAAC GTGATCCGGA TGCGGAACTG GTTGCGGCGG TCGGCCGGGG AGAACCGGCG 
GCGACAAGCC AACTGGTCGC ACGCAAGCTG CCGCGTCTGC TGGCGCTGGC GCTACGTCTG 
CTGGGCGATC GCATGGCGGC GGAAGATGTG GCCCAAGAGG CATTCATGCG CGTCTGGAAG 
CAGGCGCCGC ACTGGCGCGA AGGCGAGGCG CGTTTCGATA CCTGGCTGCA TCGCGTCGCG 
CTCAACCTGT GCTATGACCG GCTGCGCGCC CGCCGTGAAG AGCCGCTGGC GGATGAGCTC 
GAGGAGACAG AACCCGCCGA TCGCCCTGAC ATACGGTTTG ATGCCCAGGT GCGCCATGCG 
AATGTCCAGA CGGCGCTGGC GGCACTGCCC GCACGCCAAC GAGAGGCGCT GGTGCTTAAT 
TACTATCAGG AATTGTCAAA CATCGACGCC GCAGCGCTGA TGGGGATCAC GGTCGATGCG 
TTTGAAAGCC TGCTTGCCCG GGCGCGTCGC AACCTGCGCG CTCAATTGTC CGAAGGGGAT 
GGGGGTAAAT CATGA 

 

Protein sequence

MSERDPDAEL VAAVGRGEPA ATSQLVARKL PRLLALALRL LGDRMAAEDV AQEAFMRVWK 
QAPHWREGEA RFDTWLHRVA LNLCYDRLRA RREEPLADEL EETEPADRPD IRFDAQVRHA 
NVQTALAALP ARQREALVLN YYQELSNIDA AALMGITVDA FESLLARARR NLRAQLSEGD 
GGKS