Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3412 |
Symbol | |
ID | 8089366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3987035 |
End bp | 3988309 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644837492 |
Product | integrase family protein |
Protein accession | YP_002988996 |
Protein GI | 242240815 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.357921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACTG ACAGCAAAGT CCGATCCGCG AAACCTCTCG CAAAATCTTA CAAGCTCACC GACTCGCAAG GCCTGTACCT CACGGTATCA CCCAGTGGCG CTAAGCTATG GTATTTCCGC TATCGCTTCG GCGGTAAAGA AAACCGTCTG GCCTTTGGCC CCTACCCGCA AACTACACTG GCGGAAGCCC GCGAAAAGCG CGATGCGGCG CGTAAATTGC TGGCATCCGG CATCAGCCCT TCTCAGCTTC GCAAAACGAA CAATCTCGCA GCTGATGAAT CCCGCACCTT TCAGTATCTC GCTCAGACGT GGCACACCAG CAGCCTGAAA CTCTGGTCGG AAGCCCACGC CGATAAAATC CTCACCTGCC TGAAACGCTA CGTTTTCCCC GCGATTGGCG CGATGGATAT CGCACAGGTT GAAACCCGCC ATCTCGCGCA GTTGGTTAAG GCAATTGACG ATAAAGGCGT GCATGACGTC GCCGGACGGG TGCGCCAGCA TCTGACCAAA ATCATGCGCC ACGCCGTCCA GCAGGGCGTA ATCAAATACA ATCCGGCTTA CGATTTGGAC GGCGTCGTGA CCCCGGTGGC GACCCAACAT CATCCCGCCC TGCCGCTAAA ACGCCTGCCT GAACTGCTGG AGAAGATGGA GAACTACAAA GGCCGGATGC TCACCCGTCT GGCACTGGAG CTGAATCTGC ATGTGTTTCT GCGCTCCAGT GAACTCCGGT TTGCCCGCTG GGATGAATTC AACCTGAAAG CGCATCTCTG GAGCGTGCCC GCCCAGCGCG AAGCGGTAGA CGGCGTGCGG TTCTCAGAGC GTGGCGCAAA GATGAAGGAT GAACATCTGG TGCCGCTGTC ACGGCAGGCG GTCGCCCTGC TGAAACAGAT TCAGGCGATT TCTGGCGAAT CGGTCTTCGT TTTTCCCGGC GCACATACCC TGAACAAACC AATGAGTGAA AACACCATCA ACAAGGCGCT GCGCGTGATT GGCTACGACA CCAAAAGCGA GGTGTGCGGC CACGGTTTCA GAACCATGGC CTGTAGCGCC CTGAACGAGT CCGGGCGCTG GTCAAAAGAC GCTATTGAGC GGCAGATGAG CCACAAAGAG CGCAATGGCG TGCGGGCTGC TTATGTACAT AAAGCGGAAC ATCTGGAAGC CAGAATCGAA ATGATGCAAT GGTGGTCAGA TTATTTGGAT GTAAACCGCG AAGGCTACGT CGCACCGTAT ATTTATGCGC GGAGCTACCG AGGAGAAGAG TTATATTGCG GCTAA
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Protein sequence | MLTDSKVRSA KPLAKSYKLT DSQGLYLTVS PSGAKLWYFR YRFGGKENRL AFGPYPQTTL AEAREKRDAA RKLLASGISP SQLRKTNNLA ADESRTFQYL AQTWHTSSLK LWSEAHADKI LTCLKRYVFP AIGAMDIAQV ETRHLAQLVK AIDDKGVHDV AGRVRQHLTK IMRHAVQQGV IKYNPAYDLD GVVTPVATQH HPALPLKRLP ELLEKMENYK GRMLTRLALE LNLHVFLRSS ELRFARWDEF NLKAHLWSVP AQREAVDGVR FSERGAKMKD EHLVPLSRQA VALLKQIQAI SGESVFVFPG AHTLNKPMSE NTINKALRVI GYDTKSEVCG HGFRTMACSA LNESGRWSKD AIERQMSHKE RNGVRAAYVH KAEHLEARIE MMQWWSDYLD VNREGYVAPY IYARSYRGEE LYCG
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