| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3410 |
|---|
| Symbol | dipZ |
|---|
| ID | 8089363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3984099 |
|---|
| End bp | 3985811 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644837489 |
|---|
| Product | thiol:disulfide interchange protein precursor |
|---|
| Protein accession | YP_002988994 |
|---|
| Protein GI | 242240813 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAC GCATCCTTAC GCTGATCCTG ATTGGCATCA GCCTGCTGTT TACCTGTCAG
GCTGTTGCGC AGAATCCCTT CGAGCGCAGC GCACAACCAT CATCATCGCG CTTTCTGCCT
GTCGATCAGG CATTTGCCTT TGATTTTCAA CAACAGGGCT CGCAACTGAC ACTCCAATGG
CAAATCCACG ACGGCTATTA TTTATACCGC CAACAGATCA GGCTGATCGG CAATAACGCC
GACATCGCCA ACGTCGAACT GCCGCCGGGA ACGCCGCACC ACGACGAATT CTTCGGCGAA
GTCAGTATTT TTCGCCAGAC GTTGTCGCTG CCGGTCTCGC TGCTAAGCGC GGAGAGCAAC
GCCACCCTGA GCGTCACTTA CCAGGGCTGC GCCGACAACG GTTTCTGCTA CCCGCCGGAA
ACCAGAAAAG TCCCCCTCAG CGCCGTCAGC CAAACGCCTG CAGCCATCAC GGCGATGCCC
GTCGATACAC CGTCAATTCC GCTGCCATTC TCACCCTTGT GGGCATTGCT GATAGGCGTC
GGCGTCGCCT TCACGCCATG CGTATTGCCG ATGTACCCGC TGATTTCCGG CCTGATTCTC
GGGCAGCGGC AACGCCTCTC ATCCCGCCGC ACGCTGCTGC TCTCGATACT GTACATTCAG
GGCATGGCGC TCACTTACAC CCTGCTCGGC GTGCTGATAG CTTACGCCGG CCTGCGTTTT
CAGGCCGCCT TGCAGCACCC CTATGTGCTC ACCGGCATCT CGGTGCTGTT CATCGCGCTG
GCGCTGTCTA TGTTCGGGCT TTACAACCTG CAGCTGCCCT CATCCCTGCA AACCCGGCTG
ACGCTATGGA GTAACCGTCA ACAGGGCGGT TCCGCCATCG GCGTATTCAT GATGGGCACG
CTCGCCGGGC TCATCTGTTC GCCCTGCACG ACCGCGCCGT TAAGCGCATT GCTGCTGTAT
ATCGCGCAAA GCGGCGACCT GCCAGCCGGC GCCGGCACAC TCTATCTGTA CGCGCTGGGC
ATGGGGCTGC CGCTACTGGG CGTAACCTTG TTCGGCAACC GTCTGCTGCC GAAGCGCGGT
GCCTGGATGA ATCACGTCAA AGAAGGATTT GGCTTCGTCA TTCTGGCGCT GCCGGTATTT
CTGCTGGGCC GGGTATTGGG TGATATCTGG GAAGCACGGA TGTGGGCGCT GTTGGGCGTG
GCTTTCTTCG GCTGGGGATT TGTATTGAGC CTGGCTCACC GTTCCGGGTG GATGCGAATA
GTACAGGTCA TCATGCTGGC CGGCGCGCTG CTGACGGTTC GCCCATTGCA GGACTGGCTA
TTCATGCCGG TTCAGGCCGC ACAGGATCGC CCTCGACCGC TCGCCTTCTC GCCCGTCGGC
AATCTGAACG AGCTTCATCG TTCGCTATCG GGTGCGGGTC GCATCACCAT GCTCGATCTG
TACGCAGACT GGTGCGTCGC TTGCAAAGAG TTTGAAAAAT ACACCTTCAG CGACGCGCAA
GTTCGGCAAC GATTATCACA ATTGCAGTTA CTGCAGGCGG ACGTTACCGC CAACAGCGAC
GCCCATCAGG CGCTGCTGCG GCATTTTCAG GTGCTAGGGC TGCCCACCAT TCTGTTTTTC
GACGCCAGCG GCCGGGAGAT TCCGGGTTCG CGAGTGACTG GCCTGTTGAA TGCAACCGAC
TTCGTCGGGC ATTTGCAGAA ACTGCCCCGC TAA
|
|---|
| Protein sequence | MAQRILTLIL IGISLLFTCQ AVAQNPFERS AQPSSSRFLP VDQAFAFDFQ QQGSQLTLQW
QIHDGYYLYR QQIRLIGNNA DIANVELPPG TPHHDEFFGE VSIFRQTLSL PVSLLSAESN
ATLSVTYQGC ADNGFCYPPE TRKVPLSAVS QTPAAITAMP VDTPSIPLPF SPLWALLIGV
GVAFTPCVLP MYPLISGLIL GQRQRLSSRR TLLLSILYIQ GMALTYTLLG VLIAYAGLRF
QAALQHPYVL TGISVLFIAL ALSMFGLYNL QLPSSLQTRL TLWSNRQQGG SAIGVFMMGT
LAGLICSPCT TAPLSALLLY IAQSGDLPAG AGTLYLYALG MGLPLLGVTL FGNRLLPKRG
AWMNHVKEGF GFVILALPVF LLGRVLGDIW EARMWALLGV AFFGWGFVLS LAHRSGWMRI
VQVIMLAGAL LTVRPLQDWL FMPVQAAQDR PRPLAFSPVG NLNELHRSLS GAGRITMLDL
YADWCVACKE FEKYTFSDAQ VRQRLSQLQL LQADVTANSD AHQALLRHFQ VLGLPTILFF
DASGREIPGS RVTGLLNATD FVGHLQKLPR
|
|---|
| |