Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3407 |
Symbol | aspA |
ID | 8089360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3980804 |
End bp | 3982243 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644837486 |
Product | aspartate ammonia-lyase |
Protein accession | YP_002988991 |
Protein GI | 242240810 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAA ATATCCGTAT TGAAGAAGAT TTATTGGGTA CGCGCGAAGT GCCTGCTGAT GCTTATTACG GCGTTCATAC ACTACGTGCT ATCGAAAACT TCTATATTAG TAACCAGAAA ATCAGTGACA TACCGGAGTT TGTGCGCGGA ATGGTGATGG TCAAGAAAGC GGCGGCCATG GCTAACCGTG AATTGCAGAC CATCCCACGT AAAATTGCAG ACGTCATCAT TCGTGCCTGC GACGAAGTGC TGGTGAACGG CAAATGTCTG GATCAGTTCC CAGTCGACGT GTTTCAGGGC GGCGCAGGTA CGTCCGTCAA CATGAACACC AACGAAGTGT TGGCCAATAT CGGGCTGGAG CTGATGGGGC ACCAGAAAGG GGAATACCAG TACCTGAACC CCAACGACCA CGTCAACAAG TGTCAGTCCA CCAACGACGC TTACCCGACC GGTTTTCGCA TCGCGGTTTA CAGCGCCATC CTGAAATTGG TGGATTCCGT CACCCAGTTG GGCGATGGCT TTGAACACAA AGCCAAAGCA TTCGAAAACA TTCTGAAAAT GGGCCGCACC CAACTTCAGG ATGCAGTGCC GATGACGCTG GGCCAGGAAT TCCACGCTTT CAACGTGTTG TTGAAAGAAG AGAATAAAAA TCTGCTGCGC ACCGCCGAAC TGTTGCTGGA GGTGAACCTG GGCGCAACCG CCATCGGTAC TCGCCTTAAC ACACCGGAAG GCTACCAGCA TCTGGCGGTG CAAAAACTGG CGGACGTCAG CAAGCTGCCC TGCGTGCCGG CGGAAGACCT GATCGAGGCA ACATCCGACT GCGGCGCTTA CGTCATGGTA CACAGCACGC TGAAACGTCT GGCGGTTAAA CTCTCCAAGA TCTGTAACGA CTTGCGTTTG CTCTCCTCTG GCCCGCGCGC AGGGCTGAAC GAAATCAATC TGCCGGAACT GCAGGCTGGC TCATCCATCA TGCCGGCCAA GGTCAACCCG GTGGTGCCGG AAGTGGTGAA CCAGGTCTGT TTCAAAGTCA TCGGCAACGA TACCTGCGTC ACCATGGCGG CGGAAGCGGG TCAGTTGCAG TTGAACGTCA TGGAACCGGT CATTGGTCAG GCCATGTTCG AATCCATCTA TATTCTGACC AACGCCTGCC GTAACTTACT GGAAAAATGC GTAGAAGGGA TCACGGCGAA CAAATCCGTC TGTGAATCCT ATGTGTTCAA TTCCATCGGC ATCGTGACCT ATCTGAACCC GTTCATCGGC CACCATAACG GCGACATCGT CGGCAAGATC TGCGCCGAAA CCGGCAAAAG CGTTCGCGAA GTCGTGCTGG AACGCGGCCT GCTGACCGAA GCCGAGTTGG ACGACATTTT CTCCGTACAG AACCTGATGC ATCCGGCCTA CAAAGCCCGG CGTTATACCG AAGATAACGA CGCATCGTAA
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Protein sequence | MSENIRIEED LLGTREVPAD AYYGVHTLRA IENFYISNQK ISDIPEFVRG MVMVKKAAAM ANRELQTIPR KIADVIIRAC DEVLVNGKCL DQFPVDVFQG GAGTSVNMNT NEVLANIGLE LMGHQKGEYQ YLNPNDHVNK CQSTNDAYPT GFRIAVYSAI LKLVDSVTQL GDGFEHKAKA FENILKMGRT QLQDAVPMTL GQEFHAFNVL LKEENKNLLR TAELLLEVNL GATAIGTRLN TPEGYQHLAV QKLADVSKLP CVPAEDLIEA TSDCGAYVMV HSTLKRLAVK LSKICNDLRL LSSGPRAGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTCV TMAAEAGQLQ LNVMEPVIGQ AMFESIYILT NACRNLLEKC VEGITANKSV CESYVFNSIG IVTYLNPFIG HHNGDIVGKI CAETGKSVRE VVLERGLLTE AELDDIFSVQ NLMHPAYKAR RYTEDNDAS
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