Gene Dd703_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3407 
SymbolaspA 
ID8089360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3980804 
End bp3982243 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content54% 
IMG OID644837486 
Productaspartate ammonia-lyase 
Protein accessionYP_002988991 
Protein GI242240810 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1027] Aspartate ammonia-lyase 
TIGRFAM ID[TIGR00839] aspartate ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA ATATCCGTAT TGAAGAAGAT TTATTGGGTA CGCGCGAAGT GCCTGCTGAT 
GCTTATTACG GCGTTCATAC ACTACGTGCT ATCGAAAACT TCTATATTAG TAACCAGAAA
ATCAGTGACA TACCGGAGTT TGTGCGCGGA ATGGTGATGG TCAAGAAAGC GGCGGCCATG
GCTAACCGTG AATTGCAGAC CATCCCACGT AAAATTGCAG ACGTCATCAT TCGTGCCTGC
GACGAAGTGC TGGTGAACGG CAAATGTCTG GATCAGTTCC CAGTCGACGT GTTTCAGGGC
GGCGCAGGTA CGTCCGTCAA CATGAACACC AACGAAGTGT TGGCCAATAT CGGGCTGGAG
CTGATGGGGC ACCAGAAAGG GGAATACCAG TACCTGAACC CCAACGACCA CGTCAACAAG
TGTCAGTCCA CCAACGACGC TTACCCGACC GGTTTTCGCA TCGCGGTTTA CAGCGCCATC
CTGAAATTGG TGGATTCCGT CACCCAGTTG GGCGATGGCT TTGAACACAA AGCCAAAGCA
TTCGAAAACA TTCTGAAAAT GGGCCGCACC CAACTTCAGG ATGCAGTGCC GATGACGCTG
GGCCAGGAAT TCCACGCTTT CAACGTGTTG TTGAAAGAAG AGAATAAAAA TCTGCTGCGC
ACCGCCGAAC TGTTGCTGGA GGTGAACCTG GGCGCAACCG CCATCGGTAC TCGCCTTAAC
ACACCGGAAG GCTACCAGCA TCTGGCGGTG CAAAAACTGG CGGACGTCAG CAAGCTGCCC
TGCGTGCCGG CGGAAGACCT GATCGAGGCA ACATCCGACT GCGGCGCTTA CGTCATGGTA
CACAGCACGC TGAAACGTCT GGCGGTTAAA CTCTCCAAGA TCTGTAACGA CTTGCGTTTG
CTCTCCTCTG GCCCGCGCGC AGGGCTGAAC GAAATCAATC TGCCGGAACT GCAGGCTGGC
TCATCCATCA TGCCGGCCAA GGTCAACCCG GTGGTGCCGG AAGTGGTGAA CCAGGTCTGT
TTCAAAGTCA TCGGCAACGA TACCTGCGTC ACCATGGCGG CGGAAGCGGG TCAGTTGCAG
TTGAACGTCA TGGAACCGGT CATTGGTCAG GCCATGTTCG AATCCATCTA TATTCTGACC
AACGCCTGCC GTAACTTACT GGAAAAATGC GTAGAAGGGA TCACGGCGAA CAAATCCGTC
TGTGAATCCT ATGTGTTCAA TTCCATCGGC ATCGTGACCT ATCTGAACCC GTTCATCGGC
CACCATAACG GCGACATCGT CGGCAAGATC TGCGCCGAAA CCGGCAAAAG CGTTCGCGAA
GTCGTGCTGG AACGCGGCCT GCTGACCGAA GCCGAGTTGG ACGACATTTT CTCCGTACAG
AACCTGATGC ATCCGGCCTA CAAAGCCCGG CGTTATACCG AAGATAACGA CGCATCGTAA
 
Protein sequence
MSENIRIEED LLGTREVPAD AYYGVHTLRA IENFYISNQK ISDIPEFVRG MVMVKKAAAM 
ANRELQTIPR KIADVIIRAC DEVLVNGKCL DQFPVDVFQG GAGTSVNMNT NEVLANIGLE
LMGHQKGEYQ YLNPNDHVNK CQSTNDAYPT GFRIAVYSAI LKLVDSVTQL GDGFEHKAKA
FENILKMGRT QLQDAVPMTL GQEFHAFNVL LKEENKNLLR TAELLLEVNL GATAIGTRLN
TPEGYQHLAV QKLADVSKLP CVPAEDLIEA TSDCGAYVMV HSTLKRLAVK LSKICNDLRL
LSSGPRAGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTCV TMAAEAGQLQ
LNVMEPVIGQ AMFESIYILT NACRNLLEKC VEGITANKSV CESYVFNSIG IVTYLNPFIG
HHNGDIVGKI CAETGKSVRE VVLERGLLTE AELDDIFSVQ NLMHPAYKAR RYTEDNDAS