Gene Dd703_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3398 
Symbol 
ID8089351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3972201 
End bp3972812 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID644837477 
ProductLexA repressor 
Protein accessionYP_002988982 
Protein GI242240801 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT TAACCACCAG ACAACAACAG GTCTATGATC TTATTCGCGA TCATATCTCT 
CAGACCGGGA TGCCACCGAC CCGTGCTGAA ATTGCAAGTC AACTCGGCTT TCGCTCGCCA
AATGCAGCGG AAGAGCATCT TAAAGCGCTG GCGCGCAAAG GTGTCATAGA GATCGTTACC
GGCGCATCTC GTGGAATCCG GTTGCTGATG GAAGAAGAAG ATCAAGGGCT ACCATTGATT
GGCCGTGTGG CTGCTGGCGA GCCCTTACTG GCTCAACAGC ATATCGAATG TCATTACCAG
GTCGATCCCG CCATGTTCAA GCCTAACGCG GATTTTTTGC TGCGCGTCAG CGGTATGTCG
ATGAAAGATA TTGGTATTCT TGACGGTGAT TTGTTAGCTG TTCACAAAAC CCAGGATGTG
CGTAATGGTC AGGTCGTCGT TGCACGTATT GAAGATGAAG TGACGGTCAA GAGACTGAAA
AAGCAGGGGA ATATTGTGCA GCTGCTGGCA GAGAACAAGG ATTTTGAGCC CATTGTCGTC
GATTTGCGTG AACAGAATTT CTCGATTGAA GGTTTGGCCG TCGGCGTAAT TCGTAACGGC
GACTGGAGCT GA
 
Protein sequence
MKALTTRQQQ VYDLIRDHIS QTGMPPTRAE IASQLGFRSP NAAEEHLKAL ARKGVIEIVT 
GASRGIRLLM EEEDQGLPLI GRVAAGEPLL AQQHIECHYQ VDPAMFKPNA DFLLRVSGMS
MKDIGILDGD LLAVHKTQDV RNGQVVVARI EDEVTVKRLK KQGNIVQLLA ENKDFEPIVV
DLREQNFSIE GLAVGVIRNG DWS