Gene Dd703_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3388 
Symbol 
ID8089341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp3965646 
End bp3966320 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID644837467 
ProductSNARE associated Golgi protein 
Protein accessionYP_002988972 
Protein GI242240791 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG TTAAAGAACT GTTGAATGCA CTCTGGCATC AGAATTTTGA CGTCCTGGCT 
AATCCCAAAC TGGTCTGGAC AATTTACATT ATGCTGTTTT TGATCTTGTT TATGGAAAAT 
GGCCTGCTGC CCGCGGCGTT TCTGCCGGGC GATAGCCTGC TGATTCTGGT GGGCGTCCTG 
GTCGCCAAAG GCACCATGAA TTACCCTTTC ACTATTGTAC TGTTAACCAG TGCGGCCAGT 
CTGGGATGCT GGATGAGCTA CCTGCAAGGT AAATGGCTGG GAAATACGCG CGTTGTTCAA 
GGATGGTTGT CACATCTTCC TGCACACTAT CATCAACGGG CACACCGGTT GTTCCATCGT 
CACGGACTGT CTGCCTTGTT GATGGGCCGG TTTCTGGCAT TTGTGCGCAC ATTGTTACCC 
ACGATTGCCG GGTTGTCTGG ATTGAATAAC GCTCGTTTTC AGCTCTTCAA CTGGATGAGC 
GGTTTTTTGT GGGTCACTAT TCTGGTTTCT CTCGGTTTTG CGCTGGGGAA AAGCCCGGTA 
TTTCGCAAGT ATGAAGACCA GTTAATGTCC TGTTTGATGC TGTTACCGCT CGTATTGCTG 
TTAGTGGGGT TAGCGGGTTC TCTGCTTGTT CTATGGCGGA AAAAACGCAT GGTGCCTCGC 
GAAAAAGGAA ATTAA
 
Protein sequence
MDIVKELLNA LWHQNFDVLA NPKLVWTIYI MLFLILFMEN GLLPAAFLPG DSLLILVGVL 
VAKGTMNYPF TIVLLTSAAS LGCWMSYLQG KWLGNTRVVQ GWLSHLPAHY HQRAHRLFHR 
HGLSALLMGR FLAFVRTLLP TIAGLSGLNN ARFQLFNWMS GFLWVTILVS LGFALGKSPV 
FRKYEDQLMS CLMLLPLVLL LVGLAGSLLV LWRKKRMVPR EKGN