Gene Dd703_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3372 
Symbol 
ID8089325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand- 
Start bp3945870 
End bp3946871 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID644837451 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002988956 
Protein GI242240775 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATG AGCGTTTTGT CAGCATTGAT AATCTGCACG TCCGTTTTCG ACGCGGTGGA 
CAGGTGATTG AGGCGGTCAA CGGCGTTTCG TTGGACGTTG GGCGTGGAGA AGTGATGGCG 
TTGATTGGGG AATCCGGCTC CGGCAAAAGC GTAACGCTGC GGGCGTTGAT GCGGTTGCAT 
CCGCCGCAGA GTACGGCTAT GAGCGGGGCT ATCCATGTGG ATGGCGAGGA TGTTCTGACG 
ATGTCTCCCG CCGCATTGCG GCGTTTCCGC GGTGCGAAAA CGGCCATGAT TTTTCAGGAG 
CCGCTGCTGG CCTTCGACCC GGTCTACAGC GTCGGCCAGC AGATAATCGA AGGGTTACGC 
CGCCATGAAG GGCTTTCCTA TCAGGCGGCG CGCCAGCGAG CGCTGGAAGC GTTGCGACAG 
GTGCGTATTC CCAGCCCTGA GCAGCGGCTT GACGCTTATC CTCATGAAAT GTCGGGAGGA 
ATGCGCCAAC GGGCGATGAT CGCGCTGGCG CTGTCGTGCC AGCCTGAGCT GTTGTTGGCG 
GATGAGCCCA CCACCGCGTT GGATGCCACG GTGCAGATCC AGATTCTGAT TCTGCTGCGC 
GAACAACAGA GGGCGTTGGG GCTGGCTATT ATCTTTGTCA CCCATGATAT CGGCGCCGCC 
GTGGAGATTG CCGATCGTGT GGCGGTGATG TATGCCGGGC GCATTGTCGA GGAGGCATCT 
CTGAAAGAGA TCATGACGCA GCCGCGTCAT CCTTACACGC AGGTACTGCT GGGTAGCCGC 
CCCCGCGGGG GGCTGAAAAA AGGCGATGTA CTGAAGTGTA TCCCCGGATC GCCGCCGGAT 
CTTTCCCGTT TGCCGCCGGG ATGCGCATTT GCCGAGCGTT GCCCTCATGC CGGCCCGGCC 
TGCTCGCAGG CGGTTCCGGA ACAGGAAAGT GTGGCGGCGC GCCATGTGGT GAGCTGCCAC 
CGCTGGCGTG AACTGCCGAT CCCCGCGTTT GCCAACTCTT GA
 
Protein sequence
MSHERFVSID NLHVRFRRGG QVIEAVNGVS LDVGRGEVMA LIGESGSGKS VTLRALMRLH 
PPQSTAMSGA IHVDGEDVLT MSPAALRRFR GAKTAMIFQE PLLAFDPVYS VGQQIIEGLR 
RHEGLSYQAA RQRALEALRQ VRIPSPEQRL DAYPHEMSGG MRQRAMIALA LSCQPELLLA 
DEPTTALDAT VQIQILILLR EQQRALGLAI IFVTHDIGAA VEIADRVAVM YAGRIVEEAS 
LKEIMTQPRH PYTQVLLGSR PRGGLKKGDV LKCIPGSPPD LSRLPPGCAF AERCPHAGPA 
CSQAVPEQES VAARHVVSCH RWRELPIPAF ANS