| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3371 |
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| Symbol | |
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| ID | 8089324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3944635 |
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| End bp | 3945696 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644837450 |
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| Product | thiamine biosynthesis lipoprotein ApbE |
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| Protein accession | YP_002988955 |
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| Protein GI | 242240774 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.891248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTTC CTGCCTTTAA ATGCATGATT TTTTTCGGTG CGCTTGGTCT GCTGACTGCG
TGTAACGGCA GCGACGGCGG CGATAAACCG TCAGTCAATA CACGTAAGTT GACCACCCTG
GAGGGAAAAA CCATGGGTAC TTTCTACAGT GTGAAAATCA GCGGTGAATT ACCGGAGGGA
CAGCCGCAAC TGCAACAAGA GATCGATGCC TTGCTGGAAC AGGCCAATAA TGAGATTTCG
ACCTATCGCA AGGATTCCAC GTTATCGCGT TTTAACCGTT ATCAAGGCAG CGATCCGCAA
CCGATTAGCG GCGGCATGGC GGATATCATT CTGACCGCGC AACGTATCGG CCGGGCGACA
GGGGACGCCA TGAATATTAC GGTAGGGCCG CTGGTCAACT TGTGGGGTTT CGGCCCGCAA
AAGCAACCAG CGACCATTCC TAGCCAGCAG CAGATCGATG CTGCTCGTCA GAAGGTTGGG
TTAAACCATC TGACATTGAT AAGCAATGAG AAAGGCGAGT GGATACAGAA GGATTTGCCG
GATCTCTATG TCGATCTCTC CACGCTGGGT GAAGGATATG GCGCGGATCT GTTGGCGCAA
TTGATGACTC AAAAAGGGAT CACCAATTAT TTGGTGTCGG TGGGCGGGGC GATCTCCAGC
CGTGGCGTAA ATGCACAGGG GTTGCCCTGG CGGGTGGCGA TCCAAAAACC GACTGACAAA
GAGAATGCTA TTCAGGCGTC GGTGAACCTG CAGGGCTATT CGATCAGCAC TGCGGGCAGC
TATCGCAACT ATTTTGAACA AAATGGCAAG CGTTACTCCC ACGTTATTGA TCCCGCAACC
GGCAGGCCAA TTACCCATCA ATTGGTTTCC GCTACGGTGA TAGCCAAAAC CGCGTTGGAA
GCGGACGGGT GGGATACCGG ATTGATGGTG CTGGGGACGG AAAAGGCATT GAAACTGGCT
GAACAGCAAA GCATGGCGGT ATATCTGATC ACCAAGACTG ATAAGGGCTA CGAGGCGGTC
ATGACCCCGC AGTTCAAGGC ATTTCTATTA CCTGAGCAGT AA
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| Protein sequence | MAFPAFKCMI FFGALGLLTA CNGSDGGDKP SVNTRKLTTL EGKTMGTFYS VKISGELPEG
QPQLQQEIDA LLEQANNEIS TYRKDSTLSR FNRYQGSDPQ PISGGMADII LTAQRIGRAT
GDAMNITVGP LVNLWGFGPQ KQPATIPSQQ QIDAARQKVG LNHLTLISNE KGEWIQKDLP
DLYVDLSTLG EGYGADLLAQ LMTQKGITNY LVSVGGAISS RGVNAQGLPW RVAIQKPTDK
ENAIQASVNL QGYSISTAGS YRNYFEQNGK RYSHVIDPAT GRPITHQLVS ATVIAKTALE
ADGWDTGLMV LGTEKALKLA EQQSMAVYLI TKTDKGYEAV MTPQFKAFLL PEQ
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