Gene Dd703_3353 details

Gene Information

• Locus tag: Dd703_3353
• Symbol: rrmJ
• ID: 8089305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 3927618
• End bp: 3928247
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644837431
• Product: 23S rRNA methyltransferase J
• Protein accession: YP_002988937
• Protein GI: 242240756
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000105485
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAACA AAAAGCGTTC TGCAAGTTCC ACCCGCTGGT TGCAGGAACA CTTTAGTGAC 
AAATATGTGC AACAGGCGCA GAAAAAAGGG CTTCGCTCTC GCGCATGGTT TAAACTTGAT 
GAATTACAAC AGTCTGACAA GCTATTCAAA CTTGGGATGA CAGTTGTCGA CCTAGGGGCT 
GCTCCCGGCG GATGGTCTCA ATATGTGGTC AGTCAGATTG GCGGAAACGG GCGCATTATC 
GCGTGTGATC TCCTCCCTAT GGATCCGATT GTTGGTGTCG ATTTCCTTCA GGGAGATTTT 
CGTGATGAAT TGGTGCTGAA AACTCTGCTG GAACGTGTTG GCGATGAAAA GGTTCAGGTT 
GTGATGTCTG ATATGGCGCC CAACATGAGT GGTACTCCTG CAGTAGACAT TCCCAGGGCC 
ATGTATTTGG TGGAACTGGC GTTGGGAATG TGCCGGGATG TATTAGCGCC GGGAGGCAGT 
TTTGTAGTGA AAGTATTTCA GGGTGAAGGT TTCGATGAGT ATCTCAGAGA GATTCGCACC 
CTGTTTACGA CAGTGAAGAT TCGTAAGCCA GAAGCCTCAC GCGCCCGTTC TCGTGAGGTG 
TACATTGTAG CGACAGGTCG CAAACTGTAG 

 

Protein sequence

MANKKRSASS TRWLQEHFSD KYVQQAQKKG LRSRAWFKLD ELQQSDKLFK LGMTVVDLGA 
APGGWSQYVV SQIGGNGRII ACDLLPMDPI VGVDFLQGDF RDELVLKTLL ERVGDEKVQV 
VMSDMAPNMS GTPAVDIPRA MYLVELALGM CRDVLAPGGS FVVKVFQGEG FDEYLREIRT 
LFTTVKIRKP EASRARSREV YIVATGRKL