| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3337 |
|---|
| Symbol | |
|---|
| ID | 8089287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3906672 |
|---|
| End bp | 3907667 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644837413 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_002988921 |
|---|
| Protein GI | 242240740 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGC TTTGCCCCGC CGGTAATCTG CCGGCATTGA AAGCCGCTAT CGAAAACGGT
GCTGACGCGG TGTACATCGG GCTAAAAGAC GATACCAACG CCCGACATTT CGCCGGCCTC
AACTTCACGG ATAAAAAATT ACAGGAAGCC AGCGACTATG TGCATCGCCA CCGGCGCAAA
CTGCACATCG CCATTAATAC CTTCGCGCAT CCGGATGGTT ATCTCCGCTG GGAACGCGCG
GTGGATATGG CGGCGCAGTC CGGCGCGGAC GCGCTGATTC TGGCGGATCT GGCGATGCTG
GATTATGCAG CGCAGCGCTA TCCGCATATC GAACGCCACG TCTCGGTACA AGCGTCCGCC
ACCAATGAGG AAGCGGCCCG CTTCTATCAA CGCAATTTTG CGGTGTCCCG CATCGTGCTG
CCGCGCGTGC TTTCCATCCA TCAGGTTAAA CAATTGGCGC GCACCAGCCC GGTGCCGCTG
GAAGTGTTCG CCTTCGGCAG CCTGTGCATC ATGTCCGAAG GCCGCTGTTA CCTCTCTTCC
TACCTGACCG GCGAATCACC CAATACCGTA GGCGCCTGCT CGCCTGCCCG CTTTGTACGC
TGGCAACAGA CCGCGCAGGG TATGGAATCC CGTCTCAACG ATGTACTGAT CGACCGGTAC
CAGGAAAATG AAAACGCGGG CTACCCGACG TTGTGTAAAG GACGCTATCT GGTGGGCGGT
CAACGCTACC ATGCGCTGGA AGAGCCCACC AGCCTCAACA CGCTGGCGCT GCTGCCGGAG
CTGATGGCGG CGGGGATCGC TTCGGTGAAA ATCGAAGGAC GCCAACGCAG CCCGGCATAC
GTCAGCCAGG TTACGCAGGT GTGGCGTCAG GCCATCGATC GCTGCCGTGC GGCGCCGGAA
CAGTTTGTGC CGACCCAGGC CTGGATGGAC GCGCTCGGCG CAGTATCGGA AGGCACCCAG
ACCACACTGG GCGCTTATCA TCGTCAATGG CAGTAA
|
|---|
| Protein sequence | MELLCPAGNL PALKAAIENG ADAVYIGLKD DTNARHFAGL NFTDKKLQEA SDYVHRHRRK
LHIAINTFAH PDGYLRWERA VDMAAQSGAD ALILADLAML DYAAQRYPHI ERHVSVQASA
TNEEAARFYQ RNFAVSRIVL PRVLSIHQVK QLARTSPVPL EVFAFGSLCI MSEGRCYLSS
YLTGESPNTV GACSPARFVR WQQTAQGMES RLNDVLIDRY QENENAGYPT LCKGRYLVGG
QRYHALEEPT SLNTLALLPE LMAAGIASVK IEGRQRSPAY VSQVTQVWRQ AIDRCRAAPE
QFVPTQAWMD ALGAVSEGTQ TTLGAYHRQW Q
|
|---|
| |