| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3327 |
|---|
| Symbol | |
|---|
| ID | 8089277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3894732 |
|---|
| End bp | 3895715 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644837403 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_002988911 |
|---|
| Protein GI | 242240730 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGAC AGGCGTCCGC CTCGCCACCG GATTATCAGG CGTTGCAACA GGCGGCCGAC
TGGTATGCCC AACTGCTGGA AGCCGACCAC GACAGCGAAC TGCACGCCCG CTGGCTACAG
TGGCTATCGG CAAGCGATGC GCACCGGCAA GCCTGGCAAT ATGTGGAAAC CATCAGCCAG
CGCTTTCAGC CGTTGCGCGG CGACGTCACG CCATTAGCGT CGCAGACGCT GCTGCAACCG
TCTACGCCGC TCACCCGCCG CTATACCTTG CGCCTTGGTG CACTACTCGC GACCGGCTCA
TTGTTATCCT GGCTGACCTG GCGCCATACG CCGGTGCGCG AAAGCCTGCT GGCGCTGGCC
GCCGACTACC GCACCGGTAC CGGCGAAATC CGTCATGTTT CACTTAGCGA CGGCACCCAA
CTCTGGCTCG ATACAGCATC CGCACTCGAT GTCAGATACA CCGATGTCCG TCGTCAGTTG
CACCTGATTG CCGGGGAAAT ATTGCTCGAC ACCGCGCCCG ACACGTTGCG ACCGCTGTTT
GTCGCCAGCC GCGAAGGCGA CATGCAGGCG CTCGGCTCTC GTTTCAGCCT ACGCCAGTTG
GCAGACAGCA CCCAACTGAC CGTATACACC GGCAGCGTGG CAGTCACGCC GCGGCAAGCA
GGCCCTCTGC GCCAGATTGA TGCCGGCCGA CAGTGGCGAT TTGACGCCAA CGGCGCCGGG
TTCGAAACCC CCATGGGAGC GCAGGATGCC GACTGGCGTC AGGGAATGCT GCATGCCAGC
GACACCCCGC TGGGCGATGT GGTCGCGCGG CTGGCTCGCT ACCGCCATGG CTATCTGGCC
TGCGCGCCGA ATGTCGCCGC GCTGCGCGTG GTCGGCACTT TTCCGCTGAT GGACACCGAT
CGGGCGCTTG CCATGCTGAG CCGGGCGTTA CCCGTGCGCA TTCACCGCCG CTTCGACTGG
TGGATCACCG TCGAACCTGT CTGA
|
|---|
| Protein sequence | MNRQASASPP DYQALQQAAD WYAQLLEADH DSELHARWLQ WLSASDAHRQ AWQYVETISQ
RFQPLRGDVT PLASQTLLQP STPLTRRYTL RLGALLATGS LLSWLTWRHT PVRESLLALA
ADYRTGTGEI RHVSLSDGTQ LWLDTASALD VRYTDVRRQL HLIAGEILLD TAPDTLRPLF
VASREGDMQA LGSRFSLRQL ADSTQLTVYT GSVAVTPRQA GPLRQIDAGR QWRFDANGAG
FETPMGAQDA DWRQGMLHAS DTPLGDVVAR LARYRHGYLA CAPNVAALRV VGTFPLMDTD
RALAMLSRAL PVRIHRRFDW WITVEPV
|
|---|
| |