Gene Dd703_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3293 
Symbol 
ID8089240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3857601 
End bp3859211 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content65% 
IMG OID644837366 
Producturea amidolyase related protein 
Protein accessionYP_002988877 
Protein GI242240696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGC GCTTTCTTCC GGTCAACCTG AATGCGCTGC TGGTGGAGCT GCGCGATCTG 
AATGAAACCC TGTCGCTGTT TGACGCGCTG CGCTACACGA CGCCCGATGG GGTCGAAGAG
ATGATCCCGG CGGCGCGCAC GTTGCTGGTG CGCTTCAATC CCCACACCAC CTCTTTTGCC
CGGCTGGCGC AGGCGATCGC CGGTTGCGAT CTCGGCCGTA GCGACACACG TCAGGGGGAA
AGGGTGATGA TCCCGGTGGA TTATCAAGGC GAAGATTTGC CGCAGGTGGC GGAGTTGCTG
GGTATCAGCG TCAGTGAGGT GATCGCGCGC CATACCGGTA ACGATTATAT GGTGGCGTTT
ACCGGTTTCG CGCCCGGTTT TGCCTACCTG TCCGGCGGGG AAAACCTGAA CGTACCGCGT
CGCAGCAGCC CGCGTCCGCG TATTCCCGCC GGCGCGGTGG CGCTGGCCGG TCTGTTCAGC
GGCGTCTACC CGCAGGAGAG CCCCGGCGGC TGGCAGCTAA TTGGTACTAC GCCGCTGAAA
ATGTGGGATC TGGCGCGCGA TGTTCCGGCG CTGCTGCAAC CGGGATCGCG GGTGGCGTTT
TGTGATAACC GCCGTCGTCC GGTGTCCGTG AGGCGTCCGG ATGCGCTGCC GGCAGCAGCG
GATAATCCGC CACTTGATAC CGGTTGTGCG TTAGTGGTGA AAACCGCCGG TTTACAAACG
CTGTTGCAGG ATGCCGGCCG CCCCGGTTTG GCCGGGCAGG GGATTTCGGC ATCCGGCGCT
ATGGATAAAG GCGCGATGCG CCGCGCCAAC CGTTTGGTGG GAAACGCGCC GGGCACCGCC
GTGTTGGAAA TCGTACAGGG CGGGCTGGTT TTCCGGGTGG AAGGCCATAC GGTGATGGCG
CTGGCGGGGG CGCCTTGCCC CGTGACCATC ACTCGCGCTG ATGGTGCGGT ATGGCAGGCC
CGTCCGTTTA CGCCAATTGC GCTGGATGAC GGCGATACCG TGACGCTCGG GATTCCCTCC
AGCGGTGTAC GCAGTTATCT GGCGGTGCGC GGCGGTTTTG CCGTGACGCC AGTCATGGGT
AGCCTGGCGA CCGACACGCT GGCGCGGCTG GGGCCTGAAC CGCTGCGGGC CGGAACCCGT
TTGCCGGTGT CGGCGCCTGA GCGGTTGACG GCGGTCGAAC TATCGGCCGA GGGCGACGTG
ACGCTGCCGG TAGCGGGGGA GACGGTCACG CTGGATGTGG TGGCCGGCCC GCGTACCGAC
TGGTTCACCG ATGAGGCCTG GCAGGCGCTG ACCGAACAGG AATGGCTGGT GACGTTGTTG
TCGGATCGCA TTGGGTTGCG TTTGCAGGCC GATACGCCGC TGGCGCGAAC GGTACTGCAC
GAACTGCCCA GCGAAGGCAC CTGCGCCGGG TCGATTCAGG TGCCGCCCAA CGGGCAGCCG
GTGCTGTTCG CGGTCGACCA TCCGTTGACC GGCGGCTATC CGGTGATTGG CTGCGTCGCC
GCTTATCATC TTGATCTGTT GGGGCAATTG CCGGTCAACG CCCGCATCCG CTTCCGGGCG
GTCACGTCTT TTTCTGCATT AACGTTGCCG GCCGACGCCG GTGCCGCCTG A
 
Protein sequence
MMMRFLPVNL NALLVELRDL NETLSLFDAL RYTTPDGVEE MIPAARTLLV RFNPHTTSFA 
RLAQAIAGCD LGRSDTRQGE RVMIPVDYQG EDLPQVAELL GISVSEVIAR HTGNDYMVAF
TGFAPGFAYL SGGENLNVPR RSSPRPRIPA GAVALAGLFS GVYPQESPGG WQLIGTTPLK
MWDLARDVPA LLQPGSRVAF CDNRRRPVSV RRPDALPAAA DNPPLDTGCA LVVKTAGLQT
LLQDAGRPGL AGQGISASGA MDKGAMRRAN RLVGNAPGTA VLEIVQGGLV FRVEGHTVMA
LAGAPCPVTI TRADGAVWQA RPFTPIALDD GDTVTLGIPS SGVRSYLAVR GGFAVTPVMG
SLATDTLARL GPEPLRAGTR LPVSAPERLT AVELSAEGDV TLPVAGETVT LDVVAGPRTD
WFTDEAWQAL TEQEWLVTLL SDRIGLRLQA DTPLARTVLH ELPSEGTCAG SIQVPPNGQP
VLFAVDHPLT GGYPVIGCVA AYHLDLLGQL PVNARIRFRA VTSFSALTLP ADAGAA