Gene Dd703_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3277 
Symbol 
ID8089223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3838421 
End bp3839455 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content46% 
IMG OID644837349 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_002988861 
Protein GI242240680 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCG CAGTCGTTAC TGGAATTACT GGTCAAGACG GTGCTTACCT GGCTGAATTA 
TTGTTAGATA AAGGTTATAC GGTATACGGT ACCTATCGTC GTACTAGTTC CGTTAACTTC
TGGCGAATTG AAGAGCTGGG TATTGATAAG CATCCCAATA TGCATTTGGT TGAATATGAT
TTGACAGACC TTTCCGCCAG TATTCGTCTT CTGCAAACGA CTCAGGCCAC GGAAGTGTAT
AACCTCGCTG CGCAAAGTTT TGTCGGTGTT TCTTTTGAAC AGCCGGTGAC AACTGCGGAA
ATTACAGGGA TTGGTCCTTT GAATCTGTTA GAGGCTATCC GTATTGTAAA TCCGAAAATC
CGCTTTTATC AGGCATCCAC ATCAGAAATG TTTGGTAAGG TTCAGGCTAT CCCACAGGTT
GAAAGTACAC CGTTTTATCC TCGCAGCCCT TATGGTGTTG CGAAATTATA TGCTCATTGG
ATGACTATCA ACTACCGCGA AAGTTATGAC ATTTTTGCTT GTAGCGGCAT TCTGTTCAAC
CACGAGTCTC CGTTGCGCGG TCGCGAATTC GTAACACGCA AAATCACCGA CTCAGTAGCC
AAAATCAAGC TGGGCAAACT GGATGTGTTG GAGTTGGGGA ACCTTGATGC AAAGCGCGAC
TGGGGTTTTG CCAAGGAATA TGTTGAAGGT ATGTGGCGTA TGCTGCAAGC AGACACACCG
GATACGTATG TGCTGGCGAC CAATAGAACT GAAACCGTGC GTGACTTCGT CTCTATGGCA
TTTAAGGCTG CTGGTTTCAC ATTGAAATTT GAAGGCTCTG CAGAAGGTGA AGTAGGTATC
GATGTGGACG CCGGTAAGGC TCTGGTTCGC GTGAACCCGA AATTCTACCG TCCGGCGGAA
GTCGAACTGC TGATTGGTAA TCCGGCCTAT GCCAAGGAAA AACTGGGATG GGCGCCTAAA
ACTACACTGG AAGAACTCTG TCAGATGATG GTGACAGAAG ATATCCGTCG TAATGAAGCA
GGATTCTCTT TCTGA
 
Protein sequence
MKSAVVTGIT GQDGAYLAEL LLDKGYTVYG TYRRTSSVNF WRIEELGIDK HPNMHLVEYD 
LTDLSASIRL LQTTQATEVY NLAAQSFVGV SFEQPVTTAE ITGIGPLNLL EAIRIVNPKI
RFYQASTSEM FGKVQAIPQV ESTPFYPRSP YGVAKLYAHW MTINYRESYD IFACSGILFN
HESPLRGREF VTRKITDSVA KIKLGKLDVL ELGNLDAKRD WGFAKEYVEG MWRMLQADTP
DTYVLATNRT ETVRDFVSMA FKAAGFTLKF EGSAEGEVGI DVDAGKALVR VNPKFYRPAE
VELLIGNPAY AKEKLGWAPK TTLEELCQMM VTEDIRRNEA GFSF