Gene Dd703_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3272 
Symbol 
ID8089218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3832186 
End bp3833211 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID644837344 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002988856 
Protein GI242240675 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAT GCCGGGTATC ATGCACTGAG CCATTCGGGA AGGTAATAGT ATTGAATATT 
TTAGTAACGG GAAGTGGCGG TTTCATCGGG CGCCGAGTGG TCGCTCTGGC AAACGAGCGA
GGTATAACTT GTGTGCTGCA TGGCAGCGAG CGCGTAGACC CAAGCGGTAG TGCGATGATT
CGCGCCAATC TGACGGCCAC GACGGACTGG ACGCCAGCAT TAATCGGTGT GGACGCAGTA
GTGCATTGCG CTGCCAGAGT GCACCAGATG CAGGATGGTG TTGATGCGCT GGCACTGTAT
CGAGAAACCA ATGTCGCAGG AACATTACGG TTAGCGCAGC AGGCCGCAGA AACTGGCGTT
AAACGGTTTG TCTTTATCAG TTCAATCAAA GTGAACGGTG AGACCACTCA ACCTGGTCAA
CCTTTTCAGC CGGATGTAGC CGTACCGCCG GCTGATCCTT ACGGCTTGAG CAAGTATGAA
GCTGAACAGG GGTTGATGCG TCTGGCACAG GAAACCGGTC TCGAAGTGGT CATTATTCGC
CCGCCATTGG TGTATGGGCC GGGCGTGAAA GCCAATTTCC GCTCGATGAT GAATTGGGTA
CGTAAAGGCG TGCCGTTACC GTTGGCGGCG GTTCATAACC AACGCAGCCT GGTGTTTGTG
GATAATCTGG CTGATTTGAT TTTGCTGGTT CTGCATCATC CGAAAGCGCC GGGGCATGTG
TGGCTGGTGT CGGATGACCA TGACGTTTCC ACCTCTGGGC TATTGGCGGA TATGGCCACG
GCGTTGGGGG TGAAAAACCG GTGCTGGCCG CTGCCAGCAT GGATACTAAA AAGTGCGGCG
GCTTCGCTTG GTAAATCTGC TGTAGCGGAG CGTTTGCTTG GGTCGCTGCA AGTGGATGTG
CGTGAAACCC GGCAGCAACT TGGCTGGCAG CCTGCGTTCT CCTACCATCA GGCAATTTCC
ATCACAGCGC AGGCATTTCT GGCGGAAATG TCTGGTGTTT CCACATCTCT ATCCAAAGAA
GGTTGA
 
Protein sequence
MFQCRVSCTE PFGKVIVLNI LVTGSGGFIG RRVVALANER GITCVLHGSE RVDPSGSAMI 
RANLTATTDW TPALIGVDAV VHCAARVHQM QDGVDALALY RETNVAGTLR LAQQAAETGV
KRFVFISSIK VNGETTQPGQ PFQPDVAVPP ADPYGLSKYE AEQGLMRLAQ ETGLEVVIIR
PPLVYGPGVK ANFRSMMNWV RKGVPLPLAA VHNQRSLVFV DNLADLILLV LHHPKAPGHV
WLVSDDHDVS TSGLLADMAT ALGVKNRCWP LPAWILKSAA ASLGKSAVAE RLLGSLQVDV
RETRQQLGWQ PAFSYHQAIS ITAQAFLAEM SGVSTSLSKE G