Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3254 |
Symbol | |
ID | 8089200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3810528 |
End bp | 3812123 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644837326 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002988838 |
Protein GI | 242240657 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCCA TTGAAGCCCA GGCGGCGCGA TTCGGTAGTT CCTACCGCTG GCTGGCGACC GTCACCATCA TGCTCGGCAC CATCGCCACC ACCGCGACGG CGACCATCGT CAACGTGGCG ATGCGCGACA TTATGGGCGC GTTCGGCATG GGGCAGGATC AGGTACAGTG GCTTTCCACC GCCTTTCTCG CCTCTATGAC CGCCACCATG CTGATGACCG CCTGGATGCT GGATCGCGTT GGCTACCGGG CCACCTATGT CGGTTCGTTA GCCATCTTCA CCCTCGGCAG CCTGCTCGGC ACCTTCAGCC AGAACAGCGC GGAAGTGATC CTGGCGAGGA TCCTGCAAGG TTGCGCATCC GGCATTATCC AGCCGCTGGC GATGATCGTC ATTTCCCAGG TATTTCCGGT TTCGGAGCGC GGCAAGGCGA TGGGCATTTA CGGCGTCGGC GTGATATTGG CTCCGGCGTT GGGCCCGGCC GTCGGCGGGC TGATGGTGGA TCAACTGAAC TGGCGCGCAG TGTTCATGTT GATCATACCG TTCTGCCTGG CCGGGATCGC CGCCGCGTCC GTGATCCTGC CGCCCAAAGG CCGTGGCGAC AGCCCGGCGC GGCGTCGCTT CGATGCGCTC GGTTTCCTGC TGATGGCGCT CTCCCTCACC ACGCTGCTGA CCGGGCTTTC CAACGGCCAA CGCGAAGGTT GGGACTCGCT TTTCATCATC GGCATGCTGG CGTTTTCCGT TCTCTGCATG GCGGGATTTA TCGTGCGGGA GCTCACGACC GCTCACCCGC TGCTCAGCCT GCGGGTGTTC GCTAATCCGG CCTTTACCTC CGGCTGTATC GTCGCGTTCG TGCTGGGGGC CGGGCTGTAT GGCTCCACCT ATATCATCCC ATTATTTCTT CAGGGAATTC AGGGGTATAC CCCCACCCGT TCCGGCTTGT TGCTGATGCC TGCCGGGTTG GCGCTGGGGA TGGTGTTTCC GTTCGCCGGC GCGTTCAGCG ACCGGCTGAA ACCCCACATG CTGGTCGCGG CGGGGTTGCT GTTGTTCGGT ATCTCCTGCT GGCTTTCCGG CGACGCCGAT ACCGATACGC CGTTCTGGAC CATGGTGTGG TGGACCATCA TCGGCCGCGT CGGCCTTGGC CTGATGCTAC CCGCCATGAA CGCCGGTTCA TTGCGGGCGC TACCACCAGA TCAATTGGCG CAGGGCGCAG GTAGCATCAA CTTCATCCGT CAGCTCGGCG GAGCGATGGG GGTTAACCTG CTGTCGGTCT TCATTGAGCG TCGCACCACA TTCCACGGGC AGGCGCTGGC ACAGGCGCTG AACGTCGGCA ACCCGCGCAG TACCGACGCC ATTCGGCAAC TCAGTCTGTT GTTCGGCCAT GGCGGCAACC CGCTGGGCGA GCCGCTGAGC AGCCAGATCA ATCCCGGCAT TCTCACCTAT CTGCAATCTA TGGTATCCGC CAAAGCGCAG ATGCTGGCGT ATCAGGACGG TTTTCTGATC GTCGCGATAG GGTTTTTCAT CGCACTGCTG CCCGCCTGGT TCGTTCGCCC CCGACCTGCG GCGGCTAGCG CAACGCGCCC GACCCATTCA CGCTGA
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Protein sequence | MSPIEAQAAR FGSSYRWLAT VTIMLGTIAT TATATIVNVA MRDIMGAFGM GQDQVQWLST AFLASMTATM LMTAWMLDRV GYRATYVGSL AIFTLGSLLG TFSQNSAEVI LARILQGCAS GIIQPLAMIV ISQVFPVSER GKAMGIYGVG VILAPALGPA VGGLMVDQLN WRAVFMLIIP FCLAGIAAAS VILPPKGRGD SPARRRFDAL GFLLMALSLT TLLTGLSNGQ REGWDSLFII GMLAFSVLCM AGFIVRELTT AHPLLSLRVF ANPAFTSGCI VAFVLGAGLY GSTYIIPLFL QGIQGYTPTR SGLLLMPAGL ALGMVFPFAG AFSDRLKPHM LVAAGLLLFG ISCWLSGDAD TDTPFWTMVW WTIIGRVGLG LMLPAMNAGS LRALPPDQLA QGAGSINFIR QLGGAMGVNL LSVFIERRTT FHGQALAQAL NVGNPRSTDA IRQLSLLFGH GGNPLGEPLS SQINPGILTY LQSMVSAKAQ MLAYQDGFLI VAIGFFIALL PAWFVRPRPA AASATRPTHS R
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