Gene Dd703_3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3183 
Symbol 
ID8089128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp3733621 
End bp3734298 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID644837257 
ProductDNA-3-methyladenine glycosylase II 
Protein accessionYP_002988769 
Protein GI242240588 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.13027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT GCCATGCTCC GTTTGACGAA AATCTTGCAC GTTCTCATCT TGCCGCCATC 
GACGATCGCT GGGAGCGGCT GATCGCCGGC GTCGGCCATA TTCGTTTTGC CAGCCGCCCT 
GGTCAGCAAC CCTACGAAGC ATTGATTCGG GCTGTCGCCA GCCAGCAGTT AAGCAACCGG 
GCGGCCGCCG CCATCATCGC GAAACTGCAA AAACAGTTCG CGATGGAGGA AACCGGCTTC 
CCCTCGCCGT CGCAATTGGC GGAGTGCCCG CCGGAGCATT TGCGCCAGTG CGGTTTCTCC 
AGCCGCAAGA TCGATACGGT ACAAGCTATC GCCCGCGGTG CGATCAGCGG GCTGGTGCCG 
GATCGCGCCA GCGCCGCCCT CATGGAGGAT GACACGCTCA TCACACAATT ATGCACTCTG 
CACGGCATCG GGCGTTGGAC CGTGGAAATG CTGCTAATCA ATACATTGGA GCGGATGGAT 
ATCATGCCGG TTGATGATCT CGGTATCCGG CAGGGTTTTC GCTATCTCTA CCAATTACCG 
AGCGACCCGA GCCGCAAGGA AATGCTGGCG TTGAGCGCGC CCTGTCAGCC CTACCGCACG 
CTGGCGGCCT GGTATCTGTG GCGCATTCCC CACATGCCGG ATTATGCGGA ATTCCGTGCT 
TCGCTGCGCG GCGCCTGA
 
Protein sequence
MTTCHAPFDE NLARSHLAAI DDRWERLIAG VGHIRFASRP GQQPYEALIR AVASQQLSNR 
AAAAIIAKLQ KQFAMEETGF PSPSQLAECP PEHLRQCGFS SRKIDTVQAI ARGAISGLVP 
DRASAALMED DTLITQLCTL HGIGRWTVEM LLINTLERMD IMPVDDLGIR QGFRYLYQLP 
SDPSRKEMLA LSAPCQPYRT LAAWYLWRIP HMPDYAEFRA SLRGA