Gene Dd703_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3135 
Symbol 
ID8088432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3680594 
End bp3681358 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID644837209 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002988721 
Protein GI242240540 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCCA CTCATCTGAA CCGGCCGTTA CTCGGCCCCC AATCCGCGTT CGGCATCCTG 
AACTCGGTGC CCCACCCGAT GCTGGTCGAG ATGATCGCCT GCGCCGGGTA CGACTTTGTA
CTCCTCGACA TGGAACACCA ACCGCACGAT GAAACGCTAC TGCAACACTG TATCGCGGTA
GCGCAAGCAC AGGGATGTAG CCCACTGGTG CGTATCCCCG GCCCCGACCG AAAACTGATC
GGACGGGTAT TGGATCTGGG CGCCAACGGT ATCGTCATCC CGCAGACGGA AAGCGCTGAA
CAGGTGTTGG CGGTACGCGA CGCCATGCGC TTTCCTCCTG CCGGCCGACG CGGCATGACC
GGTGGCCCGG TGACGGGCTT CGGCACGCTG CCGTTGCCGG AATACATCGC CCGAGCCAAC
AGCGAACTGC TGCTGATCCC GATGATCGAG TCCGCCGCCG GTATTCGGGA GATCGACAAT
ATTCTGGCGG TGGAAGGCGT CAGTCTGGTG ATGGAAGGCG CGCTCGATCT GGCGCTGGAT
CTCGGCCTCG GCCCCACGCC GCATCATCCT GATGTCGAAG CCCGGCTGCG TCACCTGGCG
GCACGCTGTC AGCGGGCAGG TATCCCGTTT TGCGCCAACC CACGCACGCC GGAACAGCAG
GAATACTGGC GACAGGCCGG CATCCGGTTA TGGCTGTGCG GCGAAGATCG CGGCTTTCTA
TTTCGCACGC TTCGCCAGCG GCTTCATGAC GTGAAGCCGT CCTGA
 
Protein sequence
MLSTHLNRPL LGPQSAFGIL NSVPHPMLVE MIACAGYDFV LLDMEHQPHD ETLLQHCIAV 
AQAQGCSPLV RIPGPDRKLI GRVLDLGANG IVIPQTESAE QVLAVRDAMR FPPAGRRGMT
GGPVTGFGTL PLPEYIARAN SELLLIPMIE SAAGIREIDN ILAVEGVSLV MEGALDLALD
LGLGPTPHHP DVEARLRHLA ARCQRAGIPF CANPRTPEQQ EYWRQAGIRL WLCGEDRGFL
FRTLRQRLHD VKPS