Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3124 |
Symbol | |
ID | 8088421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3661255 |
End bp | 3665379 |
Gene Length | 4125 bp |
Protein Length | 1374 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644837199 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002988711 |
Protein GI | 242240530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.957955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA ACATGGCCCG GCGTTCAGCC ATCAGCGCGG TCAATAATAT GCTTCATGCC CATCTGATCA CTGCTATGAC ATTTTTAGCG TGTCTCGGGC TGACGATGTT GGTTGCCGTT GCCGTCAATC ACCTCAATGA GCAGCGCATC AAGGCCGCGA TCATCGATAG CGCCACGCCG CTGTTCAATT CTGTCATCGA TAAAATGAAC CGCTACCGCT ATGGCTTGCT GGAAGCGCGA ACCGCGGTAC TGGCCAGTGG CGGGGAAGAT ATTAATCCGC AAGGATATTA TCAGTACGGT GCGACCCTGG ATTTGGCGAA TAACTTTCCG GGCGCCCGAG GCTTTGGTTT TGTGCGCCGG GTTCTGCGGG CCGAGCTGGC GGATTATCTG GATAGAGAAC GTCATGCGCA TCTGCCTGAT TTTTCAGTGA GCAGTTTCGG CGATGAACAG GATGAACTGT ATGTCGTCGA GTATCTGGAG CCGCGGAGTT TCAGTTCCAA CGCCACGGTG ATTGGCCTAG ATCTGGCGTC GAATCCATTC AGAAAACATG CGGCGGATGA AGCGATGCTA TCCGGCCAAG CCATCATCAC CTCTCCGCTT TCGTTAAAGT TCGGCCTGGA TACGATTTCC AATTCGTTCT TGTTATTTAT GCCGATTTAC CGTGATGGGG TGACGCCGGA TGATGAAGCG GAGCGGCGGC GGAAAGCCTT TGGTTGGGCG TATGCCCCCA TCAGTATGGC CGAAGTGCTT AAGAATGAAT CCTTCAGCGA AGGCCGGGTC ATCCTGCGTT TGAGCGATGT GACCGAACTG GGCGATCCGA TGGTGTTTTA CCGCAGCGCT GAACAGGAAG GCCTGTATCC GTATTACCAC GATGTTCCTG TTTTGGGGCG AGTCTGGCGG TTCAGCCTCA CCGTGACCCC GGCTTATCTG GATACGCTCA ACCTGTTTTC CATCACCGGC GTCATCCTCT TCGGTATCGG GCTCTCGGTC GTGATGGCGA TGCTGGTGAA TACGCTGAAA TTGCGCCGTG CCGACAGAAA GCAGCTCCAG CAAGAGCGCA GCAAACTGGA GATGATCGTC GAAAGCTCCC CTGACGGCAT CATCGGTAAG GATACGCAAG GCATTGTTAT CAGTTGGAAC GGCGGCGCCG AGCGCCTGTT TGGTTATACG CGCGAAGAGG CCATCGGTCG CCCATTGGTT GACTTGATTA TTCCCGAACA GTTCAAGGAC GAAGAGCCCG ATATTTTACG CCGGGTCTGC GCGGGGGAAA CCGTCAGCGC GTTTGAAACC CTCCGTCACC GTAAAGATGG CTCTGAACTT GTCGTATCCG CCACGATCTC GCCGATTCGT TCCCCTGATG GGCGGGTGAT AGGCGTGTCT AAAACTGTGC GGGATATTTC GCTGCAAAAA GAAGCGGAAA GACGGATTCG GAACCTGAAT AGTGAGCTGG AGCAGCAGGT TCGTCAGCGC ACCACCGAAC TGGCCGAGGT CAACCTGCTG TTCCGCACCG TGTTGTCCGC CGCCCATGAG TTTTGCATTA TCGCCACCGA TTTGAACGGC GTGATTACGT TTTTTAATAA AGGCGCGGTG CAGATGCTGG GGTACAGCGA GGATGACGTG GTAGGAAAAG CGACGCCTGC GATTTTCCAT GACGAAGACG AGCTGGCCTC TCGCCGCCAT GAATTGAGTG ACGAATACGG TGAGGCGATC CACGGGTTTG ACGTCTTTAC CTACAAAGCG CAGCGAAATC AGTCGGAGCA TCGTGAGTGG ACCTATTGGC GCAAGGATGG CAGCCGCTTC CCGGTCAATC TGGTGGTGAC GGCCATGCGG GACGAGCAGG ATCAGCTACT GGGCTATCTA GGGGTCGCGA CCGATATCAC TCGGCAGCGC CAGGCTCAGG ATGCATTAGA AAAAGCCAAG CGTCAGGCGG ATGAGGCTAA TGAAGCGAAA ACCATGTTTT TGGCCAATAT GAGCCATGAG ATCCGCACCC CGATGAATGC GGTGCTGGGC ATGTTGCAAC TGTTGCTGCG AAACAATTTG ACGCCCAGGC AGCATGCGTT TGCCTCAAAA GCGCATATCG CGGCGACCTC CCTGCTGGGG TTGCTCAACG ATATTCTCGA TTACTCGAAA ATCGATGCAG GCAAACTGGA GCTGGATCCT CAACCCTTTG ATTTCAATGC GGTGATGCAA CATTTAGCGA TCATGTTTTC GGGGAACTTG CGCGCTAAAT CCATCGAACT GTTATTCGAT CTGGATCCGC AACTTTCCCC TTACATGATT GGCGATGAGC TTCGGTTGCA GCAGGTGCTG ATTAATCTGC TCAGTAATGC GATCAAATTT ACCGATCACG GCGATGTCAT CGTTAAAACG GTGCTGTTGG CGGGCGACGC AACGACGCAA CAGATGCGCA TCAGCGTAAC AGACAGTGGC ATCGGCATTA GCCCGGAGCA GCAGACGCGC ATTTTCGGTG AATTTATCCA GGCGGAAGCC TCGACGACCC GACGTTATGG CGGTACCGGT TTGGGGTTGG TCATCTGTAA ACGTTTGGTG GAAAAAATGG CGGGCGTGCT GGAGGTGGAC AGTGCTTTAG GGCAGGGCAG CACCTTCTCG TTGACGCTGA CCTTCCCCAG GGATACGACG GTGGAATGGG TGCCGCCGAA GTTGACTACC GTCCCGCCGC GGATCCTGGT CGTGGATGAT AACCATACCG CCGGCGCGCT GTTGGTTTCG ATGTTGGCTG CGTTGCAGAT ACCCGCCGTC GATGTGGTGA ACGCCGCACA GGCGCTCGCG GCATTGAAGC AGGCATCCGA ACAGGGCAAC CCGTTTGAGA TCGTGCTGAT TGATGAGGAG ATGCCGGATA GGGACGGCTT CTCCCTGGTT CGCCAGATTC GTCACGATGC GGCGCTGCCC TCGCCGCCGA CCCTCATTTT ACTGGGTTCC GCCAGTGATG AGGGGATGCC GGAATCTGGC GCGTCTCCCG ATATTGATCG GGTGCTTGCT AAACCGGTAA TGCCGATACC GCTGCTTCAG GCGATTGCGC CCCAGGGGGA AACGCCGCCG GCGCCGGACG CGGGGGCGGC CGCAGTGGAT AGCGCGGGAG AGATGTTGAA GGGCTTATCC GTGCTGTTGG TTGAAGATAA TGCATTTAAT CAGGAAGTCG CGCGCGAGCT TCTGATCGGG GAAGGGGCGA GCGTCACGAT TGCGTCTGGC GGGGAAGCGG GCGTCAGGTG TGTTACGCAG GGTGAACATC GGTTTGACGT GGTGTTGATG GATCTCCAAA TGCCGGATAT CGATGGTTTT GAAGCCACCC GGCGTATTCG CGCCCACCCG GACGGCCGCA CGCTGCCTAT CATCGCCATG ACTGCGAACG TCAGCCAGGC GGATAAACAG GCCTGCCAGG CGGCGGGGAT GAACGGGCAT CTTGGCAAAC CGCTTGATTT TACTGATGTG ATCCGGACGT TGGCGCCGTT GGTTGGCCGG GCATTCACCG GTGAGACTTC TTCTTCGCAA GAGCATGGCC CTTTGGCGCG GGCGTTGCAG CGTTTCGGCG GCAACCGCGT CTTGTTGGAG AAACTGTTGC ACTCGTTTAT GCCGTCATTC AGGACGCTGT CGGAGACCCT GAAACAGCAG TGCGCCGCGC AACATTGGCA GGACGGCATG GCGACGCTGC ATACCCTGAA GGGGATCACC GGGACGGTTG GGTTGGATAC GTTTTTTCAA CGGTTGGCGT CGACGGAAGC GGCATTGAAA TGTGCTGCGG ATACGGAAAA GGCGGCGCTT TTTCACCCAT TACTGACCAC GCTTGATACG GATGCGCAGC GGGAATATGA AACGCTGAAC GCGCTGATTG CCGGGACGCC GCCGGAAGAT GACATATCGC CAGCCGGGCC GCCGCCGGAT ATCGACATTC CGACGGCGCT GACCGCATTG GATACGCTGC TGAGCAGCGG CAATCTTAAA GCGATTTCTC AGGCGGAACG GTTGTCCGAT GCGCTCAGGC ATGAGGTGGC GCTGGCGACG TTGCTCCGGC AACTGGCGCA GGCCACGGAG AACCTCGAGT TTGATGATGC AAGCCGTATT CTGGCTTTGA TAAAGGAGCA TCCCGATGTG GAAAAATATG CTTGA
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Protein sequence | MKKNMARRSA ISAVNNMLHA HLITAMTFLA CLGLTMLVAV AVNHLNEQRI KAAIIDSATP LFNSVIDKMN RYRYGLLEAR TAVLASGGED INPQGYYQYG ATLDLANNFP GARGFGFVRR VLRAELADYL DRERHAHLPD FSVSSFGDEQ DELYVVEYLE PRSFSSNATV IGLDLASNPF RKHAADEAML SGQAIITSPL SLKFGLDTIS NSFLLFMPIY RDGVTPDDEA ERRRKAFGWA YAPISMAEVL KNESFSEGRV ILRLSDVTEL GDPMVFYRSA EQEGLYPYYH DVPVLGRVWR FSLTVTPAYL DTLNLFSITG VILFGIGLSV VMAMLVNTLK LRRADRKQLQ QERSKLEMIV ESSPDGIIGK DTQGIVISWN GGAERLFGYT REEAIGRPLV DLIIPEQFKD EEPDILRRVC AGETVSAFET LRHRKDGSEL VVSATISPIR SPDGRVIGVS KTVRDISLQK EAERRIRNLN SELEQQVRQR TTELAEVNLL FRTVLSAAHE FCIIATDLNG VITFFNKGAV QMLGYSEDDV VGKATPAIFH DEDELASRRH ELSDEYGEAI HGFDVFTYKA QRNQSEHREW TYWRKDGSRF PVNLVVTAMR DEQDQLLGYL GVATDITRQR QAQDALEKAK RQADEANEAK TMFLANMSHE IRTPMNAVLG MLQLLLRNNL TPRQHAFASK AHIAATSLLG LLNDILDYSK IDAGKLELDP QPFDFNAVMQ HLAIMFSGNL RAKSIELLFD LDPQLSPYMI GDELRLQQVL INLLSNAIKF TDHGDVIVKT VLLAGDATTQ QMRISVTDSG IGISPEQQTR IFGEFIQAEA STTRRYGGTG LGLVICKRLV EKMAGVLEVD SALGQGSTFS LTLTFPRDTT VEWVPPKLTT VPPRILVVDD NHTAGALLVS MLAALQIPAV DVVNAAQALA ALKQASEQGN PFEIVLIDEE MPDRDGFSLV RQIRHDAALP SPPTLILLGS ASDEGMPESG ASPDIDRVLA KPVMPIPLLQ AIAPQGETPP APDAGAAAVD SAGEMLKGLS VLLVEDNAFN QEVARELLIG EGASVTIASG GEAGVRCVTQ GEHRFDVVLM DLQMPDIDGF EATRRIRAHP DGRTLPIIAM TANVSQADKQ ACQAAGMNGH LGKPLDFTDV IRTLAPLVGR AFTGETSSSQ EHGPLARALQ RFGGNRVLLE KLLHSFMPSF RTLSETLKQQ CAAQHWQDGM ATLHTLKGIT GTVGLDTFFQ RLASTEAALK CAADTEKAAL FHPLLTTLDT DAQREYETLN ALIAGTPPED DISPAGPPPD IDIPTALTAL DTLLSSGNLK AISQAERLSD ALRHEVALAT LLRQLAQATE NLEFDDASRI LALIKEHPDV EKYA
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