| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3096 |
|---|
| Symbol | |
|---|
| ID | 8089932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3634262 |
|---|
| End bp | 3636451 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644837174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002988686 |
|---|
| Protein GI | 242240505 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.800251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCT CATTCACCGA TAACACCACA TCGCTGCCCG AGGAAAAATT TCATTTTTCA
CCCGATGCTC ATGCGGCGCT GACTGCGTTG CGTGATAGCG CGGACGTACA CGAACTTTAC
AGCAGCCTGG TCAGCGATAT TGAAAGCGAA ACGCAGCAAC TCCTGGCCTT ACAGCTAATC
CAGACATTCC TGAGTGCGCC GCTGCCGTCG CCGACATGGG AGCGCGCCGG GTTTGAGGCG
TATATTGTCC GGGCGAAGAC GACGCTGGCA CAGTCCGCGA CCATGCTGCT CCGGTCTGAT
GAAGAAGAGC GCAGTATCCT GCTGAAGCAA CGGGCGTTGC TTTCGATGCT GGCCGGATGC
TGGCTTGATC GGGTGTCCCA GCCCGCCACC GAACCTGCCG GCGTCGTGAA CCTGCTGAAT
GCCCATCACT TTACGCTGAA GGGCTGCGGT GAAATCAGCC TCAGTCAGCA ACAACAACGT
CAGCGCCGCT TTGCCGCGTC AGGTATCACC CTTCCTTTTA TCGGCGTAGC CGGTGCGCCG
ACGCAGCTGC ACAGCAATGC GCTGACGCTT TGGCAGGCCG TATTTTGGCT GGCTTTTTCC
CGTTTACCCG CCAGTTATCT GCCGGAAGTC GCCGGTATCC ATTTTGCTTA TTACGCGCTT
GGTTTTGACG ATGCGCTGCT GGAAATGCCG CCGTCGCTGG CGGCCACGCA GTGTATGACG
CTGCTGGACG GTTGGCTGAG CGCTTGTAAT GACTCCGAGG GGGGCAGGGA GGATCTGCAA
CGGTTTTATC GGGCGGCCAG CCTGGCGACT GAGCTGGAGC TGAGCCATGC CGGCATGCTG
CTGACGCAAC AGGAACAGCT TGCGGCCCGA ACGCCGGATG ATCGCATGGC TGAGATCATG
GTGCGCCATT TTCCTTTTGC GGGGAAACAG CACCAACTGG TCATGCTGGA GAAAAAAGCG
CTGAGCCAAT GGAGCATGGA TGACGCCGCC GGGATGGCAG CGTTTTTAAC TGCCTTTAAA
CGCTCACCGT ATTTACGGCA AAAGGACGCA AAGCCGGAGG CCTGCCGTTT CATGCAGGCC
ATCCGCTTCG GCGGCGCCAT GTTTGGTATT TTCAGTCAGC GCGAGGCTGA AATCATGGCG
TCCTGGATTG CTGATGCCCA CCAGCATGAA CGTGAAATTA CGCTGAGCCG TTTCCGGGAA
CCGGGAGACG CGCAGGCAAC CCTCTGGCGC GATCGCTATC GTTGTACCCG CATTGATTCA
CTGCTCACTC TTGAAACGCC ATCGTTGCCG GAAGCCCGCA CGCTGTTTTA TCGCCTTGTG
AACATTGAGC ACTATGCCAG CCACCTGGCG GCGATCAAAC AACGGGTGAT GGACACGCTG
CAACAGGCTC AGGTGCTGTT TGCCTGTGGT CAGCAAGGGC GTTACACCGA CGCCAGCGAG
TTCAGTTACA GCCCTGAGGC CCTGCGGGCG AGGACGGACG CGATTTACTG GCAAAAACTG
GTGAATCCCC TGGAACGGCT GACGAGCATT CCCGATCGTG AAAGTGTGAT TTTCAATCAG
AAACTGATGG CGTTGGGAAG CATGATTGAC GGCGCCTGGG CCCATCGTTT CGGCAGCGTG
TTGCGCAGCC ATCGCCGCAG CGACGGCATG ATGCTGGCCA TTTATGCGGA TGAAATGGGG
CGCGGCGACG TGGAGAAAAA TCATATTACG TTGATCCTGC GTGTCCTGCA CAGCATGGAG
GTTATGCTTC CGCACATCCG CGACCCTGAA TTCTGCCACC AGCAGGAATT ACCGGATATC
TATGACTTCT CCCTGCACCA GCTGAGCATG TCCCTGTTTC CGGATTCATT TTATGAAGAA
CTGCTGGGCT ACAACCTGGG AATTGAAATG CTGGGGCTGG GCGAAATGCG CATACACGAG
ATTCAGAAGC TGCGCCGTTA CGGCTTCGAC ACCATTTACG AGGAAGCCCA CCTCACCATC
GACAACTTCT CCGCCGGACA CGCCCGGCAA TCCGTTGATT TGATTATCGC CTACATGGAA
GACCTGCCGC CGAATATGAC GCCGGACGAA CGTCAGCAAC GCTGGTGCCG CATATGGCGG
GGTTATGCCT CTTTTGCGTG GTTCCTGGAA ACCGACCTGA AAAATAACGT ATCCGCCGCT
GCGAATACAT ACAGCGAAGT ATTGATTTAG
|
|---|
| Protein sequence | MSFSFTDNTT SLPEEKFHFS PDAHAALTAL RDSADVHELY SSLVSDIESE TQQLLALQLI
QTFLSAPLPS PTWERAGFEA YIVRAKTTLA QSATMLLRSD EEERSILLKQ RALLSMLAGC
WLDRVSQPAT EPAGVVNLLN AHHFTLKGCG EISLSQQQQR QRRFAASGIT LPFIGVAGAP
TQLHSNALTL WQAVFWLAFS RLPASYLPEV AGIHFAYYAL GFDDALLEMP PSLAATQCMT
LLDGWLSACN DSEGGREDLQ RFYRAASLAT ELELSHAGML LTQQEQLAAR TPDDRMAEIM
VRHFPFAGKQ HQLVMLEKKA LSQWSMDDAA GMAAFLTAFK RSPYLRQKDA KPEACRFMQA
IRFGGAMFGI FSQREAEIMA SWIADAHQHE REITLSRFRE PGDAQATLWR DRYRCTRIDS
LLTLETPSLP EARTLFYRLV NIEHYASHLA AIKQRVMDTL QQAQVLFACG QQGRYTDASE
FSYSPEALRA RTDAIYWQKL VNPLERLTSI PDRESVIFNQ KLMALGSMID GAWAHRFGSV
LRSHRRSDGM MLAIYADEMG RGDVEKNHIT LILRVLHSME VMLPHIRDPE FCHQQELPDI
YDFSLHQLSM SLFPDSFYEE LLGYNLGIEM LGLGEMRIHE IQKLRRYGFD TIYEEAHLTI
DNFSAGHARQ SVDLIIAYME DLPPNMTPDE RQQRWCRIWR GYASFAWFLE TDLKNNVSAA
ANTYSEVLI
|
|---|
| |