| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3063 |
|---|
| Symbol | |
|---|
| ID | 8089899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3568619 |
|---|
| End bp | 3573331 |
|---|
| Gene Length | 4713 bp |
|---|
| Protein Length | 1570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644837144 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_002988656 |
|---|
| Protein GI | 242240475 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGA GCCAACTGGT GTTGTCATTG ATGGAACAAG GGATCTATCT GACTATCTCA
AAGGGGGATC TGATCTATAA GTCGCTCAGC GGAGAGCCGA AAAGCACGTC TCTGGCGTTA
CTTAAACAAC ATAAAGTGGA ATTGTTGGAC TTCTATAAAG GGATCTGGCA AAGCGTAAAC
CACACTGACC GCCAATTTCC TGAGCGGGGG GATTTTGAGA TAGCACCACT CTCGTTTTCC
CAAGAACGGC TGTGGCTAAA TGAACGGCTG GGGGCTGAAG AACAGATCGG ACAATACAAT
ATTACGGGCG CGTGTCGGCT GGAAGGCAGA GTAGATATTT CCGCCATTGA ACAAGCGCTT
GAGGCGCTGG TGGCGCGTCA ACCTGTATTG CGGACGATCA TTTTGCAGGA CGCCGATCTT
GGGGTTATGC AAGTGGTGCG TGAGAATACG CCCTTATTAC TGCAGCAGCA GGATTTAAGC
GGCGATCCGC AGGCCGCCAA GGCAGAGCAG CAGCTTATCC AGCAGGAAAG CGCCCGACCT
TTCGATCTGG AACGGGATAT GATGCTACGC GTTAACCTGC TTAAGCGCAG CGAGATCGAG
TATGTGCTGG TTTTCACCAT GCATCATATC GTTTCTGATG GTTGGTCGAT GAATCTATTA
ATCGATGAGT TTGGCACGCT TTATAACGCC TACGCTCAAC GTCGGGAGGC TGCACTACCG
CCGTTGCCCC TGCTTTACAC CGATTACGCC CGCTGGCAGC GCTATGTGGC TAATGAGAAC
ACCGATCAGA AAAAGCAGCA TTATTGGAAA GCGCAACTGG CAGGCATTCC GCCCGTTCAT
AACGTGCCGC TCGATTTTTC CCGTCCGGCG AAGCAACGAT TTCACGGCGC AGCGCGTGAT
ACGCTGATTG CGCCGGAGCA GGTTGCTCTC TTCGAAGTGC TGTGCCGCCA GCACGACGCA
ACCCTGTTTA TGGGGCTGCA TGCGGTGTTT GCTGTGCTAC TCGCGCGCTA CAGCGGCGAA
AAAGACATTG TGATGGGAAC GCCGATTGCC AACCGAGAGC GCCTTGAACT GGAGGCGCTG
ATTGGATTTT TCGTTAATAT GATGGTGTTG CGCATCGATC TGTCCAGCAA CCCAACTTTC
GAACAGTTAC TCGCCCGCAG CAAGACCTGC ATCTCCGATG CGTTTGCCCA CGCCCAGCCC
TTTGGTTACG TGGTGGATGC CGTACAAACG GAGCGTAGCC TTAGCTATAG TCCGATTTTT
CAGATAGTGA TTTCGCTGCA AAGCAACACA CACCGGGGCG CGCAACTCAA TGGCGTTAAT
ATTCAAACCC TGCCCGTCAC CCGCGACAGC GTTAAATACG ATCTGGTGTT GGATTTCGCC
CCCAGCGCAG ACGGATTACG TTTGACGTGG GAATACAATA CCGATCTCTT TTCCACCGCT
ACGATTGCAG GGATGGCGGA ACATTTTGCT ACCCTGTTCT GCCAGGTGAC AGCGACGCCG
ACGGCGGAAC TGTTTGGTTT ATCTCTGCTC GGTGAGCATG AGAAAACGCG TTTATTGACC
TGGGGCAACG CGCAGTCCGA CGTTCGGCGC GTGGACGATA AAACACTGAT TGATTTTCTT
CGCCAACAGG TCGTACTGCG CCCGCAGGCG ATCGCGCTAA TGTGTGATCA GGCATCGATC
AGCTACGGTG AACTGGGGCA ATGGGTTGAA AACGCTGCTT TTGTCCTGCG CTATCAGGGG
ATAAAACCAG GGAATGTGGT GGGGGTGTGT GCGGAGAAAT CCTTTGAGTG GGTCGCCAGT
ATGTTCGCCA TCTGGCAATG CGGCGCAGTG TATCTCCCCA TCGCGCCCAA TACGCCGTCG
GCACGCGTCG ACTATATGCT CAACGATGCT GCCGCCAGCC TGCTGCTCTT TGATCAAGCG
GGGGCGCCAG CCGCAGAGGT TCAGGCGACC TCTTTGGCAA AGATGTCGCT CGAGGCGCTT
CTGCGCGAGC GAGGCGTCGC TCGGCAAGAG GCACCTCAGG CGCCGTGGGA TAACGCAGCG
ATAGCTTATT TGCTCTACAC CTCCGGTACG ACGGGGCGAC CCAAAGGCGT TCTCATTAGT
CACGCCAATG CCGTCAGTGT CCTTGATGGC GTTGCTGACC TTTTTGATAT CGCGCCGGAC
ACGGTGATGC CCGCTATTGC TTCCGCCGCT TTCGATATCT CTCTGTTTGA AGTCGTGATG
CCGTTGATGC GAGGAGGGCA GGTGATGCTC TACCGCCACC ATGAGGTGAC GGATATTCCA
CGGCTGGTCA GCGATATCGA TCACTGGACA AGTCTGCATG CCGTACCAGC ATTGATGAAT
GCCATTCTTG ATGAGTGTGA TCTTAAACGG CTACAGCCAG TAAAACTGCG TCAACTGTTC
GTTGGCGGGG ATAGTGTTTC AAACCAGATC CTACAACGAT TAAAAACGAC GTTTGCCACA
CAGCAGATTG TGGAGCTCTA TGGGCCGACA GAGGGAACGA TTCTCTCGAC GGCGAACTTG
ATCAATGAAC CGGTTGGAGA ATTAAAAGGC GCGGTGATTG GGCATCCTTT ACCGCATGCG
AGAATCTATA TTCTCGATGA GGAGGGTAAC CTGACTCCTC AGGGGGTGGC CGGTCAGTTG
TGTATCGGCG GAGCGGGGGT GGCCGTAGGC TATTTGAACC GGGACGAAGA AAACCATCGA
CGTTTTATCC ACAGAGCATC GCCAGCCGCG GCGTCTGAGT ATGAGCGGCT TTACCATACC
GGTGATATTG CCCGTTGGCG AAGTGACGGC AACCTGGAAT TTTTAGGCCG CAACGACAGC
CAAGTCAAGC TACGGGGATA CCGTATTGAA CTGGCAGAGA TCGAAGCCTT GCTGTGTCAG
CGCAGTGATA TCAAGCAGGC ATTGGTTGTG GTGCAAAATC GCAACGATAA CCCCTGTCTG
GTCGCCTATA TTATTGGTGA GGGCGCCGAT GATCCTAAGA CCCTGCGCCA TTGGCTGGCT
AAGCAACTCC CTGACTATAT GGTTCCCTCC GCGTACTGTA AGCTGGCCTC GCTGCCGTTG
ACGGTTAACG GCAAAGTGGA CAGATCCAGA CTTCCAGAGG TTGCCGTTCA CACCGAGGTT
GCTGAGACTA CCCCCTTGCG CAACGAACGT GAACGAGAGC TTTGTCGCAT ATGGGAGCAC
GTTCTTGGCG TACCGAACGT TGGCATTTAC GATGATTTTT TCGCTATCGG CGGCCATTCA
TTGGCGGCTA TTAAGATCGA TATGATCTGT CGGCAGACGC TTAAGGTGGA TGTGCCGCTT
TCGCTCATTT TTGAACATAA AACCATTGCG AATATCTCCG CATTCATCGC GGAAAAACAG
GATGTCATCA CCATTCCTCA TGTGGAACAG CAGCGTCACC CGCTTTCACT GGCGCAAGAG
CAGATGTTGT TTACCGAAGA GCTCGGCAAA GGTGGCAGTG CCTATCATAT TCATTACTTT
TCCCCGTTGG ATAACGATGC CGATATTCCC GCATTAATCG AAGCCATTAA TCGCACAGCC
GAGCGTCATC CGGTGCTCAA ATCGGTCTAT TTGTTCGGGG ATAACAATGA GTATGAGCAG
GTTCGGCTTG ACGGAGATAT CGAGGTTTTG CACCAAGCGG TAGACGGGGA AGACGCATTG
CATAGCGCGG TTGAAGCCTG TATTGCTGCC CCGTTTGATT TAGGTCGAGA ACCGGGCCTA
CGGGTGCGTA CCTGGTCGGT GGGCAACACA AACTATTTAT TGTTGCTGTT CCACCATATC
GCTTTTGACG GTTGGTCGGA GCGCGTGTTT ATGTTCGAAC TGGCGCAGAT CTATCAGGCG
CTGATTCAGC GCAACGCGGT GACGATGGCC GACCCCGTGA TCAGTTATGG CGATTATGCC
CGCTGGGAAA GAAACCTGCT GGCAGACAAC GGGCTTGAAT CGTTTAACAC TTTTTGGCGT
ACTCAGTTGG CGGGGATTTC GCCGTTGTCG TTGCCGCTAG ATTATCCACG TCCGGCGTTT
TTGGTACATG ATGGAAAGAT TTATAATGTT GATTTTTCAT ATGAAAAATA CCAGATATTG
AAAACGGTAG CTCGAGAAGA GAGCACCACG CTGTATGCTG TTCTGTTGAG TGCTTTTTTC
CTGACGTTGT CGTCAATCTG CGAGCAGAAC GATATTGTCA TCGGAACCCC TTCTGATAAC
CGCGATCTTC CACAGGTACG GGAGGTCGTG GGCTTATTCG CCAACACGTT AGCGCTACGC
AGCAGAATCC AGCCTGAGAT GACGCTCTCT GATTATATTG CCGGGGTGCA TCAATTGATA
ACCCACGCCA AATCACACCA ACAGCTTCCG TTTGGCAAAG TGGCGGAGAT GATCGCCGGC
AGACCCGACC CATCAATTCA TCCGGTGTAT CAGGTCACGT TCAGCGTGAT TGATGCGGTC
GAGTCGAAAA AATGGCAGCA ATGGTTGCCT ATCGATTTTG AAACCAGCAG GAAGAAAAGA
GCGCTCTACA ACCCAGCCAA ACTGGATCTC TCGCTGGATC TGGTTGATTC CGGCGATCAT
ATGTACGGCG GTTTTACCTA TGCGACGTCG CTGATGACAG AGCAGACGGT CATCATGATC
GCAGAACGGT TGAAAAGCAT CCTGGCGGGG TTGGCGGATA AAAGGGAACG ACGCATCCAC
ACCCTGTTGA CGCCGTGGCT AAAACAGGGC TGA
|
|---|
| Protein sequence | MKMSQLVLSL MEQGIYLTIS KGDLIYKSLS GEPKSTSLAL LKQHKVELLD FYKGIWQSVN
HTDRQFPERG DFEIAPLSFS QERLWLNERL GAEEQIGQYN ITGACRLEGR VDISAIEQAL
EALVARQPVL RTIILQDADL GVMQVVRENT PLLLQQQDLS GDPQAAKAEQ QLIQQESARP
FDLERDMMLR VNLLKRSEIE YVLVFTMHHI VSDGWSMNLL IDEFGTLYNA YAQRREAALP
PLPLLYTDYA RWQRYVANEN TDQKKQHYWK AQLAGIPPVH NVPLDFSRPA KQRFHGAARD
TLIAPEQVAL FEVLCRQHDA TLFMGLHAVF AVLLARYSGE KDIVMGTPIA NRERLELEAL
IGFFVNMMVL RIDLSSNPTF EQLLARSKTC ISDAFAHAQP FGYVVDAVQT ERSLSYSPIF
QIVISLQSNT HRGAQLNGVN IQTLPVTRDS VKYDLVLDFA PSADGLRLTW EYNTDLFSTA
TIAGMAEHFA TLFCQVTATP TAELFGLSLL GEHEKTRLLT WGNAQSDVRR VDDKTLIDFL
RQQVVLRPQA IALMCDQASI SYGELGQWVE NAAFVLRYQG IKPGNVVGVC AEKSFEWVAS
MFAIWQCGAV YLPIAPNTPS ARVDYMLNDA AASLLLFDQA GAPAAEVQAT SLAKMSLEAL
LRERGVARQE APQAPWDNAA IAYLLYTSGT TGRPKGVLIS HANAVSVLDG VADLFDIAPD
TVMPAIASAA FDISLFEVVM PLMRGGQVML YRHHEVTDIP RLVSDIDHWT SLHAVPALMN
AILDECDLKR LQPVKLRQLF VGGDSVSNQI LQRLKTTFAT QQIVELYGPT EGTILSTANL
INEPVGELKG AVIGHPLPHA RIYILDEEGN LTPQGVAGQL CIGGAGVAVG YLNRDEENHR
RFIHRASPAA ASEYERLYHT GDIARWRSDG NLEFLGRNDS QVKLRGYRIE LAEIEALLCQ
RSDIKQALVV VQNRNDNPCL VAYIIGEGAD DPKTLRHWLA KQLPDYMVPS AYCKLASLPL
TVNGKVDRSR LPEVAVHTEV AETTPLRNER ERELCRIWEH VLGVPNVGIY DDFFAIGGHS
LAAIKIDMIC RQTLKVDVPL SLIFEHKTIA NISAFIAEKQ DVITIPHVEQ QRHPLSLAQE
QMLFTEELGK GGSAYHIHYF SPLDNDADIP ALIEAINRTA ERHPVLKSVY LFGDNNEYEQ
VRLDGDIEVL HQAVDGEDAL HSAVEACIAA PFDLGREPGL RVRTWSVGNT NYLLLLFHHI
AFDGWSERVF MFELAQIYQA LIQRNAVTMA DPVISYGDYA RWERNLLADN GLESFNTFWR
TQLAGISPLS LPLDYPRPAF LVHDGKIYNV DFSYEKYQIL KTVAREESTT LYAVLLSAFF
LTLSSICEQN DIVIGTPSDN RDLPQVREVV GLFANTLALR SRIQPEMTLS DYIAGVHQLI
THAKSHQQLP FGKVAEMIAG RPDPSIHPVY QVTFSVIDAV ESKKWQQWLP IDFETSRKKR
ALYNPAKLDL SLDLVDSGDH MYGGFTYATS LMTEQTVIMI AERLKSILAG LADKRERRIH
TLLTPWLKQG
|
|---|
| |