Gene Dd703_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3055 
Symbol 
ID8089891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3554574 
End bp3556646 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content45% 
IMG OID644837136 
ProductCarbamoyltransferase 
Protein accessionYP_002988648 
Protein GI242240467 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAT TAGGGTTGTC TGGCGGTATA GACACGTTAT TCTCCAATGA CTTTAAGTTA 
GGTATGGAAA CGCTGTCTCA TGACAGCGCG GCAGCATTAA TGATCGATGG GCGCGTGATT
GCCGCCGTGG AAGAAGAACG CCTTAACAGG ATCAAACATA CCAACTTATT TCCATCGAAT
GCTATCGAGT TTGTGTTACA GCAGGCCAAT ATCGGCGTTG AAGATGTTGA TGTTTGCGCT
ATTTATTTGA ATGAAACATT TTTGACCATC GGGGCTATGG TTCGCCAAAT CGAACTTGGA
CGGGCGTCGA TACAAATGAA CCTGCGTTCT ATCATTGCGC AACGACTACA AGAGGCGAGC
GATAGCGCAC TGGATATTGA TCAGATAGCA AGAAAGATAA GGTTTTATGA TCACCATTTG
TGCCATGCCA AGAGTGCGCT TCATTATGCT GGTGAGGGAA AGTCGCTGGT GTTTGTCGTC
GATGGCATCG GTGAGGAGGT TTCTGGTTTA ATCGGGTGTC TCTCGCCAAA CGGTGATTTC
GACGTTTTGG AAACGTTATC GAGATCGCAG TCTATTGGTC TTTTTTATCT GAGTGTTACT
CGTTTTCTTG GGTTTTCCTT TCATGACGAA TATAAAGTGA TGGGGATGAG TTCGTATGGT
GATCCGTCGG TTTTTGAGGC ATTGGTCGGT TCGCTATACT ACAAAAATAA ACAAAACAGG
TATGAGTTCC TCTCTGCGCC CGAAATATAT TGCCGTTTAG TGCAGCAGAT ATCACCGAGA
GGAAAAAATA CAGAAGTTAC TCAGGCGCAT AAAGATTTGG CCGCTGCCCT GCAAAAAGCG
GTGGATGGCA TTATTCTTGA TATCGTCAGC CATTGGCGTG ACGTCACCCA GACGCGTTCC
CTGATTATGT CAGGGGGCGT TGCGCAAAAT TCGGTCACGA ATGGCAAAAT ATTACGTTCG
GGACTGTTTG ATGAGATTTT CGTTTCTCCC GTCAGCCATG ACGGAGGCTG TGCCCTGGGG
GCAGCAATAT TAGCGACGGA AACTGCGGGT ATTATCATAC CTCGCGCCAT GAAGTTCGAT
CCGTATTTAG GTCCCGCTAT CGGTGGCGAA ACAGATATTC AGGCCGCGTT GGAAAAGTGG
CAACCCTTTA TCGAGGTAAC CCATTCGGAC GCGATTGAAA GTGAAACTGC GTCTTATCTG
GCAAAAAACT ATGTGGTGGG GTGGGTGCAA GGCCGAGCAG AATATGGCCC TCGTGCATTA
GGGAACAGAA GCATTTTGGC CGATCCGCGT CCCAAAAGTA ACCGCCAGCG AATCAATCGC
ATTGTCAAAC ATCGTGAGGA TTTCCGGCCA TTTGCGCCCG CGGTATTATC CGACTATGCG
AGTAAGCTTT TTGATATCCC TTCCAGCCAG TGTCAGTTGG ATTTTATGAC GCATGTTGTT
AACGTGAAAG CGCCTTATCG TGAATTACTT GGCGCGGTTA CACATGCTGA CGGTTCCGCA
CGTATCCAAA CGGTTTCACG TGAAGATAAC ACCAAGTTTT GGCGATTAAT TAGCGAGTTC
AACCGACTCA CTGATTGCCC GGTGTTACTG AATACGTCGT TTAACAATCA TGCAGAGCCT
ATTGTGACGT CGGTAGAGGA TGCCATTGTT AATTTTTTGA CCTGTGAGCT GGATTTGTTG
GTTGTCGATA ACTTCATTGT CCACAAGAAG GCCTTGAACG AACATAATCT TCTGCAACTG
TCGTTGTCAC TTCCTCCCCA TATTGGTCTA CGCCAGGACG TTCAGCAGAG AGATAAAAAA
CGGATGCAAA CAAACTTTTA TCTGTATGGC AGGACAACAC ATGCCGAATA TCCTATAACA
GAGGCGATGT ATTATTTACT CAACCGCTGC CAATATGGCA ATAATCAACT CTCTTCATTG
ATAACCGAAT TAGCGCCAGA TCTGTTTAAT ACATTAAAGA CACTGTGGTT TGAGCGTCTG
ATTGTGCTTA GGCCAGGAAA TTACACTGAA CAAATAAGTA TAAATTATCT GAACAAAATG
CCGATGGATT CTACAAATGG TTCAATAAAT TAA
 
Protein sequence
MITLGLSGGI DTLFSNDFKL GMETLSHDSA AALMIDGRVI AAVEEERLNR IKHTNLFPSN 
AIEFVLQQAN IGVEDVDVCA IYLNETFLTI GAMVRQIELG RASIQMNLRS IIAQRLQEAS
DSALDIDQIA RKIRFYDHHL CHAKSALHYA GEGKSLVFVV DGIGEEVSGL IGCLSPNGDF
DVLETLSRSQ SIGLFYLSVT RFLGFSFHDE YKVMGMSSYG DPSVFEALVG SLYYKNKQNR
YEFLSAPEIY CRLVQQISPR GKNTEVTQAH KDLAAALQKA VDGIILDIVS HWRDVTQTRS
LIMSGGVAQN SVTNGKILRS GLFDEIFVSP VSHDGGCALG AAILATETAG IIIPRAMKFD
PYLGPAIGGE TDIQAALEKW QPFIEVTHSD AIESETASYL AKNYVVGWVQ GRAEYGPRAL
GNRSILADPR PKSNRQRINR IVKHREDFRP FAPAVLSDYA SKLFDIPSSQ CQLDFMTHVV
NVKAPYRELL GAVTHADGSA RIQTVSREDN TKFWRLISEF NRLTDCPVLL NTSFNNHAEP
IVTSVEDAIV NFLTCELDLL VVDNFIVHKK ALNEHNLLQL SLSLPPHIGL RQDVQQRDKK
RMQTNFYLYG RTTHAEYPIT EAMYYLLNRC QYGNNQLSSL ITELAPDLFN TLKTLWFERL
IVLRPGNYTE QISINYLNKM PMDSTNGSIN