Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3055 |
Symbol | |
ID | 8089891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3554574 |
End bp | 3556646 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644837136 |
Product | Carbamoyltransferase |
Protein accession | YP_002988648 |
Protein GI | 242240467 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACAT TAGGGTTGTC TGGCGGTATA GACACGTTAT TCTCCAATGA CTTTAAGTTA GGTATGGAAA CGCTGTCTCA TGACAGCGCG GCAGCATTAA TGATCGATGG GCGCGTGATT GCCGCCGTGG AAGAAGAACG CCTTAACAGG ATCAAACATA CCAACTTATT TCCATCGAAT GCTATCGAGT TTGTGTTACA GCAGGCCAAT ATCGGCGTTG AAGATGTTGA TGTTTGCGCT ATTTATTTGA ATGAAACATT TTTGACCATC GGGGCTATGG TTCGCCAAAT CGAACTTGGA CGGGCGTCGA TACAAATGAA CCTGCGTTCT ATCATTGCGC AACGACTACA AGAGGCGAGC GATAGCGCAC TGGATATTGA TCAGATAGCA AGAAAGATAA GGTTTTATGA TCACCATTTG TGCCATGCCA AGAGTGCGCT TCATTATGCT GGTGAGGGAA AGTCGCTGGT GTTTGTCGTC GATGGCATCG GTGAGGAGGT TTCTGGTTTA ATCGGGTGTC TCTCGCCAAA CGGTGATTTC GACGTTTTGG AAACGTTATC GAGATCGCAG TCTATTGGTC TTTTTTATCT GAGTGTTACT CGTTTTCTTG GGTTTTCCTT TCATGACGAA TATAAAGTGA TGGGGATGAG TTCGTATGGT GATCCGTCGG TTTTTGAGGC ATTGGTCGGT TCGCTATACT ACAAAAATAA ACAAAACAGG TATGAGTTCC TCTCTGCGCC CGAAATATAT TGCCGTTTAG TGCAGCAGAT ATCACCGAGA GGAAAAAATA CAGAAGTTAC TCAGGCGCAT AAAGATTTGG CCGCTGCCCT GCAAAAAGCG GTGGATGGCA TTATTCTTGA TATCGTCAGC CATTGGCGTG ACGTCACCCA GACGCGTTCC CTGATTATGT CAGGGGGCGT TGCGCAAAAT TCGGTCACGA ATGGCAAAAT ATTACGTTCG GGACTGTTTG ATGAGATTTT CGTTTCTCCC GTCAGCCATG ACGGAGGCTG TGCCCTGGGG GCAGCAATAT TAGCGACGGA AACTGCGGGT ATTATCATAC CTCGCGCCAT GAAGTTCGAT CCGTATTTAG GTCCCGCTAT CGGTGGCGAA ACAGATATTC AGGCCGCGTT GGAAAAGTGG CAACCCTTTA TCGAGGTAAC CCATTCGGAC GCGATTGAAA GTGAAACTGC GTCTTATCTG GCAAAAAACT ATGTGGTGGG GTGGGTGCAA GGCCGAGCAG AATATGGCCC TCGTGCATTA GGGAACAGAA GCATTTTGGC CGATCCGCGT CCCAAAAGTA ACCGCCAGCG AATCAATCGC ATTGTCAAAC ATCGTGAGGA TTTCCGGCCA TTTGCGCCCG CGGTATTATC CGACTATGCG AGTAAGCTTT TTGATATCCC TTCCAGCCAG TGTCAGTTGG ATTTTATGAC GCATGTTGTT AACGTGAAAG CGCCTTATCG TGAATTACTT GGCGCGGTTA CACATGCTGA CGGTTCCGCA CGTATCCAAA CGGTTTCACG TGAAGATAAC ACCAAGTTTT GGCGATTAAT TAGCGAGTTC AACCGACTCA CTGATTGCCC GGTGTTACTG AATACGTCGT TTAACAATCA TGCAGAGCCT ATTGTGACGT CGGTAGAGGA TGCCATTGTT AATTTTTTGA CCTGTGAGCT GGATTTGTTG GTTGTCGATA ACTTCATTGT CCACAAGAAG GCCTTGAACG AACATAATCT TCTGCAACTG TCGTTGTCAC TTCCTCCCCA TATTGGTCTA CGCCAGGACG TTCAGCAGAG AGATAAAAAA CGGATGCAAA CAAACTTTTA TCTGTATGGC AGGACAACAC ATGCCGAATA TCCTATAACA GAGGCGATGT ATTATTTACT CAACCGCTGC CAATATGGCA ATAATCAACT CTCTTCATTG ATAACCGAAT TAGCGCCAGA TCTGTTTAAT ACATTAAAGA CACTGTGGTT TGAGCGTCTG ATTGTGCTTA GGCCAGGAAA TTACACTGAA CAAATAAGTA TAAATTATCT GAACAAAATG CCGATGGATT CTACAAATGG TTCAATAAAT TAA
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Protein sequence | MITLGLSGGI DTLFSNDFKL GMETLSHDSA AALMIDGRVI AAVEEERLNR IKHTNLFPSN AIEFVLQQAN IGVEDVDVCA IYLNETFLTI GAMVRQIELG RASIQMNLRS IIAQRLQEAS DSALDIDQIA RKIRFYDHHL CHAKSALHYA GEGKSLVFVV DGIGEEVSGL IGCLSPNGDF DVLETLSRSQ SIGLFYLSVT RFLGFSFHDE YKVMGMSSYG DPSVFEALVG SLYYKNKQNR YEFLSAPEIY CRLVQQISPR GKNTEVTQAH KDLAAALQKA VDGIILDIVS HWRDVTQTRS LIMSGGVAQN SVTNGKILRS GLFDEIFVSP VSHDGGCALG AAILATETAG IIIPRAMKFD PYLGPAIGGE TDIQAALEKW QPFIEVTHSD AIESETASYL AKNYVVGWVQ GRAEYGPRAL GNRSILADPR PKSNRQRINR IVKHREDFRP FAPAVLSDYA SKLFDIPSSQ CQLDFMTHVV NVKAPYRELL GAVTHADGSA RIQTVSREDN TKFWRLISEF NRLTDCPVLL NTSFNNHAEP IVTSVEDAIV NFLTCELDLL VVDNFIVHKK ALNEHNLLQL SLSLPPHIGL RQDVQQRDKK RMQTNFYLYG RTTHAEYPIT EAMYYLLNRC QYGNNQLSSL ITELAPDLFN TLKTLWFERL IVLRPGNYTE QISINYLNKM PMDSTNGSIN
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