| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3047 |
|---|
| Symbol | |
|---|
| ID | 8089883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3546234 |
|---|
| End bp | 3548216 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644837130 |
|---|
| Product | Site-specific DNA-methyltransferase (adenine-specific) |
|---|
| Protein accession | YP_002988642 |
|---|
| Protein GI | 242240461 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG AACGTATTAC TGAATTTAGC GCTAAACAGA AAGAAAATGC GGAACAACAT
TGCAGTATTG ATGCCTTGGC TGAGGGTCAG CAGGATGAGT TTTGTTCATC ACCTTCCGAT
ATCAGCAGCG ACCTCTTTGA CATCCCAAGC ACTACCCCGA ATTTCCGTAC CGAACTGGCT
GGTCAGCTTG CCGAACTAAT TCCAGAGGTT GTTGCGGATG GCAAGCTGGA TGTCGAAAAA
CTTCGTGAAC TGCTGGCCGA TGATGTGGCT GACAGTAATG AGCGCTTTGG CCTGTTCTGG
CCGGGCAAAA AGCGCGCGCT GCGCGCCGCA CAGGCACCGA CTACCGCCAC CCTAAAACCA
GATTCCGTCA ATTCGAAAGA GTGGGACACG ACGCGGAATG TGTTTATCGA GGGAGACAAT
CTCGAAGTAC TGAAGATCCT GCAACGACAT TATCACAACA AGGTCAAGCT GATTTATATC
GACCCGCCTT ACAACACCGG AAAGGATTTT GTTTATCCCG ATAACTACAA GGAAGGGCTG
GACAGTTATC TGGAGTGGAC GCGGCAGGTG AACGAGGAAG GTAAGAAAGT TTCCACCAAC
AGCGAGACCG AAGGGCGTTA TCACTCCAAC TGGCTGAACA TGATGTACCC GCGCCTTAAG
TTAGCCCGTA ATTTGCTCAC CGATGATGGA GTGATTTTTA TTTCGATTGA TGACAATGAA
CAGGAGAACC TTCGTAAACT TTGCAATGAG GTTTTTGGTG AAGGGCGCTT TATTGCGCAA
CTTATTTGGA AGTCTAGAGT AAGCGAAGAT ACTCGAGCTA CGACGGGTGT TTCAACTGAC
CACGAGTACA TTCTCGTTTA TTCAAAAACT GAGAATGCTG TTTTTCGTGG AACGGAAAAA
GACAAAACGA AGTTTAATAA TCCAGACAAT GATCCACGTG GCCCATGGCG TAGTGCCGAT
CTTACAGGAT TAGCGGCAAA AGATGCTCGA CCAAACTTAC ACTATGACCT GATAAACCCT
GCCACTTGCG AAAATTATGG GTGCCCACCG AAAGGATGGC GATTCGAACC GGAAACCATG
CGAAAAAAGA TCATGGAAGG CAGAATCTTA TTCCCAGCGA CTTCTGGTGG TCGCCCCAGA
CATAAATTGT TTCTTAAAGA AATGCGAAGT CTTTTTAAGA ATATGAGTTC GGTAATAACT
GATTCAAATA CCGCTGTGGG AACCAGGGAA ACAAACGGAC TAATTGGAAA TGGTGTTTTC
AGTTTTCCGA AACCTGTTTC GCTTATTTTT TCACTTGCCG AGCAAATCAT GAGTGATGAA
GACATCATCC TTGATTTCTT CGCTGGCAGT GCCACCACCG CTCATGCCGT AATGCAGCTT
AATGCTGAAG ACAACGGCAA ACGTCGTTTT ATCATGGTAC AACTACCTGA ACCTACTCCT
GAAGCTTCAG AAGCGCGCAA GGCAGGCTTT GCCACTATTG CTGATATCTC GCGCAAGCGC
ATCGAACTAG CGGGCGAGAA AATAAAATCC GATGTTGCAG AAAGCAATAT AGATACCGGC
TTCCGCGCCT ATAAGCTGAC GGACACCAAT TTCACCAAAT GGCGAGTCAC CAGCGATATC
GAACCAGATA AGCTAACCCA GCATTTGCTC GACCTGCGTG GCAGTAGCAC TGATGAGGCC
AGTCCCGATG ACCTGCTTAC TGAGCTGCTG CTGAAACTCG GCTATTCGTT GAACGAACAT
CTCAGTGTAC AGACTATCGC CGGGCTGGAC ATCCATGCCA TCGTTGGCGA CGCAGACAAG
CCCCATCTGC TGGCGTACTT AAACGAGCGA ACTAAACCCA CACTGGAACA ATTGCGGGAA
CTGGTGAATG CCGAACCTAC GCGCCTGATC GTTCTGGAAG ATGCCTTCCA CGGTGACGAC
GAACTGAAAA CCAATATTGC TCAATATGCC AGAAGCAAAG GTATTGAGCT GAGGACGGCG
TGA
|
|---|
| Protein sequence | MANERITEFS AKQKENAEQH CSIDALAEGQ QDEFCSSPSD ISSDLFDIPS TTPNFRTELA
GQLAELIPEV VADGKLDVEK LRELLADDVA DSNERFGLFW PGKKRALRAA QAPTTATLKP
DSVNSKEWDT TRNVFIEGDN LEVLKILQRH YHNKVKLIYI DPPYNTGKDF VYPDNYKEGL
DSYLEWTRQV NEEGKKVSTN SETEGRYHSN WLNMMYPRLK LARNLLTDDG VIFISIDDNE
QENLRKLCNE VFGEGRFIAQ LIWKSRVSED TRATTGVSTD HEYILVYSKT ENAVFRGTEK
DKTKFNNPDN DPRGPWRSAD LTGLAAKDAR PNLHYDLINP ATCENYGCPP KGWRFEPETM
RKKIMEGRIL FPATSGGRPR HKLFLKEMRS LFKNMSSVIT DSNTAVGTRE TNGLIGNGVF
SFPKPVSLIF SLAEQIMSDE DIILDFFAGS ATTAHAVMQL NAEDNGKRRF IMVQLPEPTP
EASEARKAGF ATIADISRKR IELAGEKIKS DVAESNIDTG FRAYKLTDTN FTKWRVTSDI
EPDKLTQHLL DLRGSSTDEA SPDDLLTELL LKLGYSLNEH LSVQTIAGLD IHAIVGDADK
PHLLAYLNER TKPTLEQLRE LVNAEPTRLI VLEDAFHGDD ELKTNIAQYA RSKGIELRTA
|
|---|
| |