Gene Dd703_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3034 
Symbol 
ID8089870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3532001 
End bp3533260 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content57% 
IMG OID644837118 
Productintegrase family protein 
Protein accessionYP_002988630 
Protein GI242240449 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACTG ACAGCAAAGT CCGATCCGCG AAACCTCTCG CAAAATCTTA TAAGCTCACT 
GACTCGCACG GCCTGTACCT CACGGTATCC GCCAGCGGCG CTAAGCTATG GTATTTCCGC
TATCGCCTCG GCGGTAAAGA AAGCCGTCTG GCTTTTGGCC CCTACCCGCA AACTACGCTG
GCGGAAGCCC GTGAAAAGCG CGATGTGGCG CGTAAGCTGC TGGCGTCCGG CATCAGCCCT
TCTCAGCTTC GCAAGGCGAA CAACCCCGCC GTTGAGGAAT CCCGAACATT CCAGTATGTC
GCTCAGGCGT GGCACACCAG CAGCCTGAAA CTCTGGTCGG AAGCCCATGC CGATAAAATT
CTCACCTGCC TGAAACGCTA TGTTTTCCCC ACGATTGGCG CGATGGATAT CGCGCAGGTT
GAAACCCGTC ATTTAGCGCA GTTGGTTAAG GCGATTGACG ATAAAGGCGT GCATGACGTC
GCCGGACGGG TACGCCAGCA TCTGACCAAA ATCATGCGTC ACGCCGTCCA GCAGGGCGTC
ATCAAATACA ATCCGGCTTA CGATTTGGAC GGTGTCGTGA CCCCGGTCGT GACCCAACAT
CACCCCGCCC TGCCGCTGAA ACGCCTCCCT GAACTGCTGG AGAAAATGGA AAACTACAAA
GGCCGGATGC TCACCCGTCT GGCGCTGGAA CTGAATCTGC ACGTGTTTCT GCGCTCCAGT
GAACTGCGTT TTGCCCGCTG GGATGAATTT AACCTGAAGG CGCATATCTG GAGCGTGCCC
GCCCAGCGCG AAGCGGTAAA CGGCGTGCGG TTCTCAGAGC GTGGCGCCAA GATGAAGGAT
GAACATTTGG TGCCGCTGTC ACGGCAGGCG GTCGCCCTGC TGAAACAGAT TCAGGCGCTT
TCCGGCGAAT CGGTCTTCGT TTTTCCCGGC GCACATACCC TGAACAAGCC GATGAGTGAG
AACACCGTCA ACAAGGCGCT GCGCGTGATC GGCTACGACA CCAAAACCGA AATCTGTGGG
CATGGTTTCA GAACGATGGC CTGTAGCGCC CTGAACGAGT CTGGACGCTG GTCAAAGGAT
GCCATTGAGC GGCAGATGAG CCACAAAGAG CGCAACGGCG TGCGGGCGGC TTACGTGCAT
AAAGCGGAGC ATCTGGAAGC CAGAATCGAA ATGATGCAGT GGTGGTCGGA TTATCTGGAC
GTCAACCGTG AGGGCTATGT CGCGCCGTAT ATTTATGCGC GGAGTCATTC GGCTGGCTAA
 
Protein sequence
MLTDSKVRSA KPLAKSYKLT DSHGLYLTVS ASGAKLWYFR YRLGGKESRL AFGPYPQTTL 
AEAREKRDVA RKLLASGISP SQLRKANNPA VEESRTFQYV AQAWHTSSLK LWSEAHADKI
LTCLKRYVFP TIGAMDIAQV ETRHLAQLVK AIDDKGVHDV AGRVRQHLTK IMRHAVQQGV
IKYNPAYDLD GVVTPVVTQH HPALPLKRLP ELLEKMENYK GRMLTRLALE LNLHVFLRSS
ELRFARWDEF NLKAHIWSVP AQREAVNGVR FSERGAKMKD EHLVPLSRQA VALLKQIQAL
SGESVFVFPG AHTLNKPMSE NTVNKALRVI GYDTKTEICG HGFRTMACSA LNESGRWSKD
AIERQMSHKE RNGVRAAYVH KAEHLEARIE MMQWWSDYLD VNREGYVAPY IYARSHSAG