Gene Dd703_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3007 
SymbolrecB 
ID8089842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3498653 
End bp3502222 
Gene Length3570 bp 
Protein Length1189 aa 
Translation table11 
GC content57% 
IMG OID644837091 
Productexonuclease V subunit beta 
Protein accessionYP_002988604 
Protein GI242240423 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR00609] exodeoxyribonuclease V, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAC GTCGGTCAGA ATCGTTAAAC CTGCTGACGC TACCGTTGCT GGGCGAACGG 
CTGATAGAGG CGTCGGCGGG AACAGGGAAA ACCTATACCC TTGCCGGTCT TTATCTCCGG
CTATTGCTGG GGCTGGGGGG AGAAAACGCT TATCCGCGGC CTTTATCGGT GGAAGAGATT
CTGGTTGTGA CGTTTACCGA AGCCGCGACG CAGGAACTGC GGGATCGTAT CCGGGATAAG
ATTCACAGTT TGTATCTCGC CTGTTTGCGC AATGAAAGTG ATGAACCGCT GGTCAAGTTG
TTATTGGCGG AAATTCCGGA TGCGTTTCGT GCTGAGGCGG CTCAGGTTTT GCTACGGGCG
GAACGGCAGA TGGACGAAGC GGCTGTCCAC ACCATTCATG GGTTTTGCCA GCGTATGCTG
GCGACCAACG CTTTTGAATC CGGGGTTTTG TTCGAGCAAC GGTTGGTGGA GGATGAAACG
CCGCTTTACC GTCAGGCATG CGCGGATTTC TGGCGTCGAT TCTGCTATCC GTTGCCGTTA
TCGGTGGCCA GCGAGTTGGG GCGTGAATGG GCGGGGCCGG ATGCGTTGTT GCAGGACTTG
ATGCCTTATT TACATGGCGA GATGCCGTTA TTGCGTCGGC CCCCTGACCC GGATGAAACC
CTGCTGGCGC GGCATCAGAA TATTATTGCC AGACTGGAGA CGTTCAAGGC CGCCTGGCTG
GGCGTGGCGA AAGAACTGGA GGCGCTGATC GGGAGTTCCG GCGTCGACAA GCGGCGTTAC
AGCAGCCGCT ATCTGCCGTT GTGGCTGAGC AATGTGACGG CATGGGCGCA GCAGCCGACG
CGCAATTATC AGCTACCCAA AGAGCTGGAG CGTTTTGGAC AGCGGGAACT GAATCAGCGA
ACCATCAAGG GCGAGCCGCC GCAACACGCT ATCTTCCTGG CTGTGGATGA CCTGCTGCAG
TCATCGCTGA CGCTACGCGA TCTGGCGATC AGTCTGGCAT TGTCCGAGGT GCGATTGTCG
ATCCGTGAGG AAAAACAGCG CCGCGCCGAA TTGGGATTTG ATGATTTGTT ATCCCGATTG
GATGAGGCGT TGCAGCAGGA CGCCGGCCAG GCGTTGGCGC AAGCGATCCG TGAGCGTTAT
CCGCTGGCGA TGATCGATGA ATTTCAAGAC ACCGATGCCC AACAATACCG GATTTTCAGT
ACCATTTATG CCGACCAGCC ACAGTGCGGC TGGCTGATGA TCGGTGATCC CAAACAGGCG
ATCTATGCTT TTCGCGGCGC GGATATCTTC ACTTATATGC GTGCCAGGGA AGATGTGCCG
TCGCACTATA CGCTCGATAC TAACTGGCGT TCGACGCCTG GGATGGTCGA AGCGGTCAAC
CGCCTGTTTC AATGTGCCGA CACACCGTTT GTGTTTTCGC AGATCCCGTT TTTGCCGGTC
AATGCCGCCG ATAACAACCG CTCGCTAACG TTTGAATACC AGGGTAGTCG CATGCCGGCG
ATGCGATTCT GGCTAACTGG CCGGGAGGGC GTGGGCGTTG GCGATTACCA ACAGGCGATG
GCGCGCCAGT GCGCCGACAG TATCTGTAGT TGGCTCAGCG CCGGGCAGCG CGGCGAGGCT
TGGTTAACTC GTGGCGAAAT GCGTCGGCCG GTGGTCGCAT CGGATATCAC GGTGTTGGTG
CGCAGCCGCT ATGAAGCGGC GCTTATCCGC CAGGCGCTGG GACGGCTGAA TATTCCTTCG
GTGTATCTTT CTAATCGCGA TAGCGTATTT GCCGCGTCTG AGGCCACTGA ATTGTTGTGG
CTGTTGCAGG CGGTGCTGGC GCCGGAGCAG GAGCGGTTGC TGCGCGGTGC GATGGCGACC
AGCCTGATGG GAATGGATGC TGCGGCGCTG GATGAACTAT GCCGCAATGA ATCGCAGTGG
GATGCGTTGG TCGATGAGTT CGCCGGGTAT CGGCATATTT GGGGGCAGCG CGGTGTTTTG
CCCATGCTAA GACGGTTGAT GCAGCAGCAT CGGCTGGCGG AAAACCTGCT GGCCAGCCCA
GAGGGCGAAC GACGATTGAC GGATGTTTTG CACATTGGCG AACTATTGCA GGAAGCCTCC
GCCGCGCTGG ATAGCGAGCA CGCGCTGGTG CGCTGGCTGG CGCAACAGAT TGCCCAACCT
AATAGTCAGT CGGAAAGCCA ACAATTGAGA CTGGAAAGCG ATCGTCATCT GGTGCAGATC
GTGACGATCC ACAAGTCAAA GGGGTTGGAA TATGCGCTGG TGTGGTTGCC GTTTATTTGC
AATTTCAGGG CGCAGCCACA GGGGATTTAC CACGATCGCC AGACCTTGCT GCCGACATTG
GATCTCAATG GCGGTGAGGA GAGCCGCACG TTGGCGGAAG AAGAGCGTTT GGCGGAAGAT
CTGCGCTTGC TTTATGTCGC GCTGACCCGC TCCATTTACC ACTGTGCCGT GGGGGTGGCT
CCGCTCTACT TACGCTCGCA GAAGAAAGAG GGAAACAGCG ATATGCATTC GAGTGCGCTG
GGTTATCTCT TGCAACGGGG GGCCGCAGCG CCAGCCGATG TGTTGGTGGC GGCGCTGGAA
GCGATGGCCG GGGATGACAT CGATATCGCC GATGTGGTGG CTGAAGACGG GGAGCCCTGG
CGCCCAGCGT TGGAAACCGC GCCTTTACTG CAGGTGCGTC AGAATAAGCG GCAATTGCAC
GATCGCTGGC GCGTCACCAG TTATTCCGGG TTACAGCAGC ACGGCGCATC GGCGATACAG
GAACTGTTTC CCCGATTGGA TCTTGAAACG AAGGGCGAGG AGGCGCAGGC GCCGGATGAG
GCATTCACGC CGCATACCTT TCCGCGTGGA GCAGCGCCCG GCACTTTTCT ACACAGTCTG
TTTGAACAAC TGGAGTTTAC CGCTGCCATT GATGAGCCAT GGCTGTTGGA GCAACTTCGG
CAGCAAGGTA TGGCGGAGGA GTGGCAACCT GTTGTGAAGG CGTGGTTGGC AACCGTGCTG
GATACGCCGC TGACGCCGGA GCATATCCGG CTGTCGGCAC TGGAAAGCCG TTTCCGTCAG
TCCGAACTGC AATTCTACCT GCCGATAGCC TCGATGCTGG ATGCCGGTAA GTTGGATCGA
CTGGCGAAAA CTCACGATCC GTTGTCGGCT GATTGCCCTG CACTCGATTT TCAGCAGGTG
AAAGGCATGC TGAAAGGTTT TATCGATCTG GTCTTTTTCT GGCAGGGGCG TTATTACCTG
CTGGATTACA AATCTAACTG GCTGGGGCCG GATGCGGGCG CTTACACGCA GCCGGCTATG
CACCGGGCGA TGGCCGAGCA TCGTTATGAT CTGCAATACC AGCTTTATTC GTTGGCATTG
CACCGTTATC TCCGCCATCG TGTTCCTGGT TATGACTATC AGCGCCATTT TGGCGGTGTT
ATCTATTTGT TTTTACGTGG AATCAGCGCA GCGTATCCGG GACATGGCGT GTTTTTTACC
AAACCGGCGC AGCTACTGGT GGATGGGCTG GATCTGCTGT TTCAGGGCGA TACGACGATA
ATGGACGACG AGGGTGCCGG TAATGCTTGA
 
Protein sequence
MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA YPRPLSVEEI 
LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL LLAEIPDAFR AEAAQVLLRA
ERQMDEAAVH TIHGFCQRML ATNAFESGVL FEQRLVEDET PLYRQACADF WRRFCYPLPL
SVASELGREW AGPDALLQDL MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL
GVAKELEALI GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR
TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE LGFDDLLSRL
DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS TIYADQPQCG WLMIGDPKQA
IYAFRGADIF TYMRAREDVP SHYTLDTNWR STPGMVEAVN RLFQCADTPF VFSQIPFLPV
NAADNNRSLT FEYQGSRMPA MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA
WLTRGEMRRP VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW
LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY RHIWGQRGVL
PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS AALDSEHALV RWLAQQIAQP
NSQSESQQLR LESDRHLVQI VTIHKSKGLE YALVWLPFIC NFRAQPQGIY HDRQTLLPTL
DLNGGEESRT LAEEERLAED LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL
GYLLQRGAAA PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH
DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG AAPGTFLHSL
FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL DTPLTPEHIR LSALESRFRQ
SELQFYLPIA SMLDAGKLDR LAKTHDPLSA DCPALDFQQV KGMLKGFIDL VFFWQGRYYL
LDYKSNWLGP DAGAYTQPAM HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV
IYLFLRGISA AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA