Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3007 |
Symbol | recB |
ID | 8089842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3498653 |
End bp | 3502222 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644837091 |
Product | exonuclease V subunit beta |
Protein accession | YP_002988604 |
Protein GI | 242240423 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC GTCGGTCAGA ATCGTTAAAC CTGCTGACGC TACCGTTGCT GGGCGAACGG CTGATAGAGG CGTCGGCGGG AACAGGGAAA ACCTATACCC TTGCCGGTCT TTATCTCCGG CTATTGCTGG GGCTGGGGGG AGAAAACGCT TATCCGCGGC CTTTATCGGT GGAAGAGATT CTGGTTGTGA CGTTTACCGA AGCCGCGACG CAGGAACTGC GGGATCGTAT CCGGGATAAG ATTCACAGTT TGTATCTCGC CTGTTTGCGC AATGAAAGTG ATGAACCGCT GGTCAAGTTG TTATTGGCGG AAATTCCGGA TGCGTTTCGT GCTGAGGCGG CTCAGGTTTT GCTACGGGCG GAACGGCAGA TGGACGAAGC GGCTGTCCAC ACCATTCATG GGTTTTGCCA GCGTATGCTG GCGACCAACG CTTTTGAATC CGGGGTTTTG TTCGAGCAAC GGTTGGTGGA GGATGAAACG CCGCTTTACC GTCAGGCATG CGCGGATTTC TGGCGTCGAT TCTGCTATCC GTTGCCGTTA TCGGTGGCCA GCGAGTTGGG GCGTGAATGG GCGGGGCCGG ATGCGTTGTT GCAGGACTTG ATGCCTTATT TACATGGCGA GATGCCGTTA TTGCGTCGGC CCCCTGACCC GGATGAAACC CTGCTGGCGC GGCATCAGAA TATTATTGCC AGACTGGAGA CGTTCAAGGC CGCCTGGCTG GGCGTGGCGA AAGAACTGGA GGCGCTGATC GGGAGTTCCG GCGTCGACAA GCGGCGTTAC AGCAGCCGCT ATCTGCCGTT GTGGCTGAGC AATGTGACGG CATGGGCGCA GCAGCCGACG CGCAATTATC AGCTACCCAA AGAGCTGGAG CGTTTTGGAC AGCGGGAACT GAATCAGCGA ACCATCAAGG GCGAGCCGCC GCAACACGCT ATCTTCCTGG CTGTGGATGA CCTGCTGCAG TCATCGCTGA CGCTACGCGA TCTGGCGATC AGTCTGGCAT TGTCCGAGGT GCGATTGTCG ATCCGTGAGG AAAAACAGCG CCGCGCCGAA TTGGGATTTG ATGATTTGTT ATCCCGATTG GATGAGGCGT TGCAGCAGGA CGCCGGCCAG GCGTTGGCGC AAGCGATCCG TGAGCGTTAT CCGCTGGCGA TGATCGATGA ATTTCAAGAC ACCGATGCCC AACAATACCG GATTTTCAGT ACCATTTATG CCGACCAGCC ACAGTGCGGC TGGCTGATGA TCGGTGATCC CAAACAGGCG ATCTATGCTT TTCGCGGCGC GGATATCTTC ACTTATATGC GTGCCAGGGA AGATGTGCCG TCGCACTATA CGCTCGATAC TAACTGGCGT TCGACGCCTG GGATGGTCGA AGCGGTCAAC CGCCTGTTTC AATGTGCCGA CACACCGTTT GTGTTTTCGC AGATCCCGTT TTTGCCGGTC AATGCCGCCG ATAACAACCG CTCGCTAACG TTTGAATACC AGGGTAGTCG CATGCCGGCG ATGCGATTCT GGCTAACTGG CCGGGAGGGC GTGGGCGTTG GCGATTACCA ACAGGCGATG GCGCGCCAGT GCGCCGACAG TATCTGTAGT TGGCTCAGCG CCGGGCAGCG CGGCGAGGCT TGGTTAACTC GTGGCGAAAT GCGTCGGCCG GTGGTCGCAT CGGATATCAC GGTGTTGGTG CGCAGCCGCT ATGAAGCGGC GCTTATCCGC CAGGCGCTGG GACGGCTGAA TATTCCTTCG GTGTATCTTT CTAATCGCGA TAGCGTATTT GCCGCGTCTG AGGCCACTGA ATTGTTGTGG CTGTTGCAGG CGGTGCTGGC GCCGGAGCAG GAGCGGTTGC TGCGCGGTGC GATGGCGACC AGCCTGATGG GAATGGATGC TGCGGCGCTG GATGAACTAT GCCGCAATGA ATCGCAGTGG GATGCGTTGG TCGATGAGTT CGCCGGGTAT CGGCATATTT GGGGGCAGCG CGGTGTTTTG CCCATGCTAA GACGGTTGAT GCAGCAGCAT CGGCTGGCGG AAAACCTGCT GGCCAGCCCA GAGGGCGAAC GACGATTGAC GGATGTTTTG CACATTGGCG AACTATTGCA GGAAGCCTCC GCCGCGCTGG ATAGCGAGCA CGCGCTGGTG CGCTGGCTGG CGCAACAGAT TGCCCAACCT AATAGTCAGT CGGAAAGCCA ACAATTGAGA CTGGAAAGCG ATCGTCATCT GGTGCAGATC GTGACGATCC ACAAGTCAAA GGGGTTGGAA TATGCGCTGG TGTGGTTGCC GTTTATTTGC AATTTCAGGG CGCAGCCACA GGGGATTTAC CACGATCGCC AGACCTTGCT GCCGACATTG GATCTCAATG GCGGTGAGGA GAGCCGCACG TTGGCGGAAG AAGAGCGTTT GGCGGAAGAT CTGCGCTTGC TTTATGTCGC GCTGACCCGC TCCATTTACC ACTGTGCCGT GGGGGTGGCT CCGCTCTACT TACGCTCGCA GAAGAAAGAG GGAAACAGCG ATATGCATTC GAGTGCGCTG GGTTATCTCT TGCAACGGGG GGCCGCAGCG CCAGCCGATG TGTTGGTGGC GGCGCTGGAA GCGATGGCCG GGGATGACAT CGATATCGCC GATGTGGTGG CTGAAGACGG GGAGCCCTGG CGCCCAGCGT TGGAAACCGC GCCTTTACTG CAGGTGCGTC AGAATAAGCG GCAATTGCAC GATCGCTGGC GCGTCACCAG TTATTCCGGG TTACAGCAGC ACGGCGCATC GGCGATACAG GAACTGTTTC CCCGATTGGA TCTTGAAACG AAGGGCGAGG AGGCGCAGGC GCCGGATGAG GCATTCACGC CGCATACCTT TCCGCGTGGA GCAGCGCCCG GCACTTTTCT ACACAGTCTG TTTGAACAAC TGGAGTTTAC CGCTGCCATT GATGAGCCAT GGCTGTTGGA GCAACTTCGG CAGCAAGGTA TGGCGGAGGA GTGGCAACCT GTTGTGAAGG CGTGGTTGGC AACCGTGCTG GATACGCCGC TGACGCCGGA GCATATCCGG CTGTCGGCAC TGGAAAGCCG TTTCCGTCAG TCCGAACTGC AATTCTACCT GCCGATAGCC TCGATGCTGG ATGCCGGTAA GTTGGATCGA CTGGCGAAAA CTCACGATCC GTTGTCGGCT GATTGCCCTG CACTCGATTT TCAGCAGGTG AAAGGCATGC TGAAAGGTTT TATCGATCTG GTCTTTTTCT GGCAGGGGCG TTATTACCTG CTGGATTACA AATCTAACTG GCTGGGGCCG GATGCGGGCG CTTACACGCA GCCGGCTATG CACCGGGCGA TGGCCGAGCA TCGTTATGAT CTGCAATACC AGCTTTATTC GTTGGCATTG CACCGTTATC TCCGCCATCG TGTTCCTGGT TATGACTATC AGCGCCATTT TGGCGGTGTT ATCTATTTGT TTTTACGTGG AATCAGCGCA GCGTATCCGG GACATGGCGT GTTTTTTACC AAACCGGCGC AGCTACTGGT GGATGGGCTG GATCTGCTGT TTCAGGGCGA TACGACGATA ATGGACGACG AGGGTGCCGG TAATGCTTGA
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Protein sequence | MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA YPRPLSVEEI LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL LLAEIPDAFR AEAAQVLLRA ERQMDEAAVH TIHGFCQRML ATNAFESGVL FEQRLVEDET PLYRQACADF WRRFCYPLPL SVASELGREW AGPDALLQDL MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL GVAKELEALI GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE LGFDDLLSRL DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS TIYADQPQCG WLMIGDPKQA IYAFRGADIF TYMRAREDVP SHYTLDTNWR STPGMVEAVN RLFQCADTPF VFSQIPFLPV NAADNNRSLT FEYQGSRMPA MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA WLTRGEMRRP VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY RHIWGQRGVL PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS AALDSEHALV RWLAQQIAQP NSQSESQQLR LESDRHLVQI VTIHKSKGLE YALVWLPFIC NFRAQPQGIY HDRQTLLPTL DLNGGEESRT LAEEERLAED LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL GYLLQRGAAA PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG AAPGTFLHSL FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL DTPLTPEHIR LSALESRFRQ SELQFYLPIA SMLDAGKLDR LAKTHDPLSA DCPALDFQQV KGMLKGFIDL VFFWQGRYYL LDYKSNWLGP DAGAYTQPAM HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV IYLFLRGISA AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA
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