Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3004 |
Symbol | |
ID | 8089839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3493855 |
End bp | 3495096 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644837088 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_002988601 |
Protein GI | 242240420 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.695553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACC CAAAAACGCC TCTGACCCGC CGACGTCTTT TGCAGGGAGC TGCGGCTACC TGGCTGTTAA GCATCAGCGG GGCTGGTATG GCTGCGGTGT CCCAGATTAT CGCTGTCCGT GTCTGGCCCG CTTCCGCCTA TACCCGAGTG ACGCTGGAAT CCAGCCATCC GCTCAAATAC CGGCAATTCT TGCTGGAAAA TCCCGATCGA CTGGTCGTCG ATATCGAAAA CGCATCGCTG AACAGTGTAT TAAAAAACGC CAACCGGCAG TTTGCGCCTG ACGATCCCTT TATCAAAACC GCGCGGGCGG GGCAGTTTGA CCAGAATACC GTCCGGCTGG TGCTGGAGTT ACGGCAGAAA ATCAATCCGA GCCTGTTTAC GCTGGCACCG GTGGCGGGTT TTCGCAATCG TCTGGTAATG GATCTGTATC CAGTCGTCGG CCGTTACGAT AACGCGGAGG ATCCGTTGTT GGCGCTGCTG GAGGATTACA ACCGGGGAGA ACTTGAACGC TCGTTGCCGC CCGAGTCGCC GAGAAAAGAG AGCAGCGCCG GGCGTGGGCG CCCGCTGGTA GTCATGCTGG ATCCTGGACA TGGTGGTGAA GATCCCGGCG CCATCGGGCG CCAGCGGACG CGGGAAAAGG ATGTAGTATT GCAGATTGCT CGTCGTTTGA AGGCCATGAT CGATCGGGAG CCGACGATGA AAGCCTATAT GACGCGCAAT GAAGATGTGT TTATTCCGTT GAAGGTGCGT GTTGCCAAGG CGCGCAGGCA GCAGGCCGAT TTATTCATAT CGATTCACGC CGATGCGTTT ACCAGCCCGG CCGCGCGTGG TTCATCGGTG TTCGCGTTAT CAAAAAAAGG CGCGACCAGT TCAGCCGCGC GTTTTCTGGC GCAGACTCAA AACGAGTCGG ATCTGATCGG CGGGGTCAGC ATGAGCGGCG ATCGTTATCT TGATCACACG ATGTTCGATA TGGTGCAGAC CCTGACTATC AGCGACAGCC TCAAGTTCGG TAAAGAGATC CTGAGCAGGC TGGGGAAAAT CAATTATCTG CATAAAAATA AGGTGGATCA GGCTGGGTTT GCGGTACTGA AGGCACCGGA CATTCCATCG ATTCTGGTGG AAACGGCGTT TATCAGTAAT CTTGATGAGG AACGTAAGTT GCGTACCAGT CGTTTCCAAC AGCAGATTGC ACAATCCTTG CTGGAAGGCA TCAAAGCGTA TTTTGCTGCG TTAACAAGAT AG
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Protein sequence | MFDPKTPLTR RRLLQGAAAT WLLSISGAGM AAVSQIIAVR VWPASAYTRV TLESSHPLKY RQFLLENPDR LVVDIENASL NSVLKNANRQ FAPDDPFIKT ARAGQFDQNT VRLVLELRQK INPSLFTLAP VAGFRNRLVM DLYPVVGRYD NAEDPLLALL EDYNRGELER SLPPESPRKE SSAGRGRPLV VMLDPGHGGE DPGAIGRQRT REKDVVLQIA RRLKAMIDRE PTMKAYMTRN EDVFIPLKVR VAKARRQQAD LFISIHADAF TSPAARGSSV FALSKKGATS SAARFLAQTQ NESDLIGGVS MSGDRYLDHT MFDMVQTLTI SDSLKFGKEI LSRLGKINYL HKNKVDQAGF AVLKAPDIPS ILVETAFISN LDEERKLRTS RFQQQIAQSL LEGIKAYFAA LTR
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