| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2965 |
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| Symbol | dnaE |
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| ID | 8089798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3454164 |
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| End bp | 3457646 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644837047 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_002988562 |
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| Protein GI | 242240381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CACGTTTTGT ACACCTGCGT GTTCACAGTG ACTATTCCAT GATCGATGGG
CTGGCGAAAG TCGGCCCGTT GGTAAAGAAA GCGGCGGCGC TGGGAATGCC TGCGATAGCG
ATCACCGATT TCACCAATCT TTGCGGGCTG GTGAAGTTTT ACGGCGGCGC CCATGGCGCG
GGTATCAAGC CGATTATCGG CGCCGATTTT TATCTGCAAA GTGAAGAGTT GGGGGATGAG
CTGGCGCGCC TCAGCGTGCT GGCGATGAAT AACGACGGTT ATCAGAACCT GACGTTGCTG
ATTTCACGCG CCTACCAGCG CGGCTATGGC GCAGCTGGGC CGACGATCGA GCGAGAATGG
CTGGTGGAGC ATCAGGCCGG ATTGCTGTTG CTCTCCGGAG GACGGCAAGG CGACATCGGC
AAGTTCCTGC TGCGCGGCAA CCAGACGCTG GTGGATCAGT GTGTGGCGTT TTATCAGCAG
CACTTTCCTC AACGTTTTTA TCTGGAACTG ATACGCACCG GCCGCCCTGA TGAAGAGAGT
TATCTGCACG CAGTGGTTGC TCTGGCTACG GAGCGCGGTT TGCCGGTGGT GGCCACCAAC
GATGTGTGTT TCATCAGTGA AGATGACTTT GATGCCCATG AGATCCGCGT CGCCATCCAC
GACGGCTTTA CGCTGGACGA CCCCAAGCGC CCTCGCAACT ACAGTCCCCA GCAATATATG
CGCAGTGAAC AGGAAATGTG CGAACTGTTC GCCGATATTC CTGAAGCGCT GGAAAACAGC
GTAGAGATCG CCAAACGGTG TAACGTCACC ATCCGTCTGG GTGAATATTT CCTGCCGCAG
TTCCCAACGG GCGACATGAC GACGGAGGAT TATCTGGTCT TGCGGGCCAG AGAAGGGCTG
GAGGAGCGGC TTGTTTTCCT GTTTCCCGAT GAAGAGGAGC GCGCCAATCG CCGGCCTGAA
TACGATGAGC GCCTGGAGAT TGAACTCAAT GTCATCAACC AGATGGGGTT TCCCGGTTAC
TTCCTCATCG TGATGGAGTT TATCCAGTGG TCCAAGGACA ACAATGTGCC GGTTGGGCCG
GGGCGAGGCT CGGGGGCGGG CTCGCTGGTG GCCTATGCGC TCAAAATTAC CGATCTGGAT
CCGCTGGCGT TTGACCTGCT GTTCGAACGT TTCCTTAATC CGGAACGTGT GTCGATGCCT
GACTTTGACG TCGATTTCTG TATGGAAAAG CGTGATTTGG TGATCGATCA CGTTGCCGAC
ATGTACGGCC GTGATGCGGT ATCCCAGATC ATCACGTTCG GTACCATGGC CGCGAAGGCA
GTTATTCGGG ACGTTGGGCG CGTACTGGGG CACCCTTACG GTTTTGTCGA TCGTATTTCC
AAACTGGTGC CGCCAGATCC TGGGATGACG CTGGAGAAAG CCTTTGCCGC CGAACCGCAA
CTGGGCGAGA TCTATGACGC GGATGAAGAG GTCAAGGCGC TGATCGATAT GGCGCGCAAA
TTGGAAGGGG TCACTCGTAA CGCAGGTAAA CACGCCGGCG GCGTGGTGAT TTCGCCGACC
AAGATCACTG ATTTCGCGCC GCTGTATTGC GATCCGGAAG GGCATCATCC GGTGACTCAG
TTTGACAAGA GCGACGTGGA ATACGCCGGT CTGGTGAAGT TCGACTTCCT GGGATTGCGC
ACCCTGACCA TCATCAACTG GGCGTTGGAG ATGATCAACC CCCGCCGGGA AAAGCAGGGG
CTGGAACCGG TGGATATCGC TGCGATCCCG CTGGATGATA AAAAAAGCTT CGATATGCTG
CAACGTTCGG AAACCACGGC GGTGTTCCAG CTTGAATCGC GCGGCATGAA GGATTTGATT
AAACGTCTGA AGCCTGACTG CTTCGAGGAT ATGATCGCGC TGGTGGCCTT GTTCCGGCCA
GGGCCGTTGC AATCCGGCAT GGTAGATAAC TTTATCGACC GTAAGCACGG ACGCGAAGAG
CTCTCCTATC CGGATATCCA GTGGCAGCAT GAATCGCTTA AGCCGGTGCT GGAACCGACT
TACGGCATCA TCCTGTACCA GGAACAGGTA ATGCAGATAG CCCAGGTGCT GGCAGGTTAT
ACGCTTGGCG GGGCCGACAT GCTGCGCCGT GCGATGGGTA AGAAAAAACC GGAGGAAATG
GCGAAGCAGC GCTCGGTGTT CAAAGAGGGC GCGGAGAAGA TGGGCGTCGA CGGCGAGTTG
TCGATGAAAA TCTTCGATCT GGTGGAGAAA TTCGCCGGTT ATGGTTTCAA CAAGTCACAC
TCGGCGGCTT ATGCGCTGGT GTCGTACCAG ACCCTGTGGC TGAAGGCGCA TTATCCTGCT
GAATTTATGG CGGCGGTGAT GACCGCGGAT ATGGACAATA CCGACAAAAT CGTCGGTCTG
GTCGATGAAT GCTGGCGTAT GGGGCTGAAA ATCCTGCCAC CGGATATCAA CAGCGGTCTG
TATCATTTTC ATGTTAACGA TGCGGGAGAG ATCGTTTACG GCATCGGGGC GATAAAAGGT
GTGGGCGAAG GGCCGATTGA AGCCATTATC GAGGCTCGCA ATAACGGCGG CTATTTCCGC
GATTTGTTCG ATCTTTGCGC CCGTACCGAT ATCAAAAAGC TGAACCGCCG GGTACTGGAA
AAACTGATCA TGTCCGGCGC GTTTGACCGG CTGGGCCCTC ACCGTGCGGC GCTGATGAAC
TCATTGCCCG ATGCCATGAA GTCCGCCGAG CAGCACGCCA GGGCGGAAGC CATTGGGCAG
TCGGATATGT TCGGTGTATT GACGGAATCG CCGGAGCAGG TTGAACAGTC GTACAGTACG
GTACCGCCGT GGCCGGAGCA GGTGGTGTTG GATGGCGAGC GCGAGACGTT GGGACTGTAC
CTGACTGGAC ATCCGATCAA CCAGTATCTG AAAGAAATTG AACGCTATGC CGGAGGCGGG
CGTTTGAAAG ACATGCATCC CACGGAGCGG GGAAAAGTCA CCATCGCCGT CGGGTTGGTG
CTGGCTGCGC GTGTCATGGT GACTAAACGA GGCAACCGTA TCGGCGTGTG TACGCTGGAC
GATCGTTCTG GTCGCCTGGA AGTGATGCTG TTTACCGACG CACTGGAGAA ATATCAGCAT
CTGTTGGAGA AGGATCGCAT TCTTATCGCC AGCGGACAGG TCAGCTTTGA TGACTTTAGC
GGTGGACTTA GAATGACTGC CCGGGAGTTA ATGGATATCA GCGAAGCGCG GGAAAAATAC
GCGCGCGGAC TTGCTATCTC GCTGACCGAC AGGCAAATTG ATGACCAGCT ATTAAACCGT
CTCCGTCAGT CGTTGGAACC CCATCGATCG GGGACGATTC CGGTGCATCT TTACTACCTG
AGAGAGGATG CGCGAGCCCG GTTACGCTTT GGTGCCGCGT GGCGTGTTAC GCCTACCGAC
GGGTTGCTGA ATGACTTACG CACTCTGGTT GGTAGTGAAC AGGTAGAACT GGAATTTGAC
TAA
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| Protein sequence | MAEPRFVHLR VHSDYSMIDG LAKVGPLVKK AAALGMPAIA ITDFTNLCGL VKFYGGAHGA
GIKPIIGADF YLQSEELGDE LARLSVLAMN NDGYQNLTLL ISRAYQRGYG AAGPTIEREW
LVEHQAGLLL LSGGRQGDIG KFLLRGNQTL VDQCVAFYQQ HFPQRFYLEL IRTGRPDEES
YLHAVVALAT ERGLPVVATN DVCFISEDDF DAHEIRVAIH DGFTLDDPKR PRNYSPQQYM
RSEQEMCELF ADIPEALENS VEIAKRCNVT IRLGEYFLPQ FPTGDMTTED YLVLRAREGL
EERLVFLFPD EEERANRRPE YDERLEIELN VINQMGFPGY FLIVMEFIQW SKDNNVPVGP
GRGSGAGSLV AYALKITDLD PLAFDLLFER FLNPERVSMP DFDVDFCMEK RDLVIDHVAD
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLVPPDPGMT LEKAFAAEPQ
LGEIYDADEE VKALIDMARK LEGVTRNAGK HAGGVVISPT KITDFAPLYC DPEGHHPVTQ
FDKSDVEYAG LVKFDFLGLR TLTIINWALE MINPRREKQG LEPVDIAAIP LDDKKSFDML
QRSETTAVFQ LESRGMKDLI KRLKPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREE
LSYPDIQWQH ESLKPVLEPT YGIILYQEQV MQIAQVLAGY TLGGADMLRR AMGKKKPEEM
AKQRSVFKEG AEKMGVDGEL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTDKIVGL VDECWRMGLK ILPPDINSGL YHFHVNDAGE IVYGIGAIKG
VGEGPIEAII EARNNGGYFR DLFDLCARTD IKKLNRRVLE KLIMSGAFDR LGPHRAALMN
SLPDAMKSAE QHARAEAIGQ SDMFGVLTES PEQVEQSYST VPPWPEQVVL DGERETLGLY
LTGHPINQYL KEIERYAGGG RLKDMHPTER GKVTIAVGLV LAARVMVTKR GNRIGVCTLD
DRSGRLEVML FTDALEKYQH LLEKDRILIA SGQVSFDDFS GGLRMTAREL MDISEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYL REDARARLRF GAAWRVTPTD
GLLNDLRTLV GSEQVELEFD
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