| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2917 |
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| Symbol | |
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| ID | 8089750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3402013 |
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| End bp | 3405696 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644836999 |
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| Product | SMC domain protein |
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| Protein accession | YP_002988514 |
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| Protein GI | 242240333 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.605657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC TCAGTCTGCG CCTGAAAAAC CTGAATTCGC TACAGGGCGA ATGGAAAATC
GATTTCGCCC GCGCGCCTTT CGTCAATAAC AGCTTGTTTG CCATCACCGG CCCGACCGGC
GCCGGAAAAA CCACGTTGCT TGATGCTATC TGTCTGGCGC TGTATCACCA GACACCCCGG
CTGAAGGTCA GCCCCAGCCA GAACGAGGTG ATGACCCGCC ACACGGCGGA ATGTCTGGCC
GAGGTAGAAT TCGAGGTGCA GGGAACCGCC TACCGCGCCT TCTGGAGCCA GCGCCGGGCG
CACGACAACC CGGAAGGCAA TCTGCAACCG CCCAGAGTCG AGCTGGCACG CTGCGCCGAC
GGCAAAATCC TCACCGATCG CGTCAACGAC AAATTGGCGC TGATCGCCGA TATCACCGGG
CTTGATTTTG GCCGTTTCAC CAAATCCATG ATGCTGTCGC AAGGCCAGTT CGCGGCCTTC
CTGAATGCAG ACGCCAACGA ACGTGCCGAG TTATTGGAGG AACTGACCGG TACCGATATC
TACGGTCAAA TATCCGAACA GGTGTTTGAA AAGCACAAAC AGTCGCAGGC CAGGCTGGAA
ACACTACAGG CGCAGGTCGC AACCATTGAA TTGATGAGCG ACGAACAGCG CACATCGCTG
GAACAACAGT TGGCCGTCTT ACAGCAACAG GAAAACGATC TGGCGCTGCA GCGCGATGAA
ATTCTGGCGC ATCAGCGGTG GTACGAGCAG CTCCAGCACT ATCAGGAGGC GCTGGCGACT
AGCGTACAAC AGCGTTCCGC GCTGGATATC GCGCTGATCC AATCCCAACC GCAGATGGAT
CGTCTGGCGC GTAGCGAACC GGCTGAAAAA CTGCGCCCGT TGTACAACGA ACGGGAACGC
TGCGCCCGCG AGAAAAGCCT GTTGACCCGG CAAATCACCA GCGTCAAACA GCAAATCGGC
CAGTATCAAA CCGCGCTGAA ACTGCTCAAA ACGCAGGCGG AAAAAACGCT GTCCGACCAG
AAAGCACATG CCGAACACCG GCAACAGCAG GAAGATCTGG TCAACGAACG CATTCTGCCG
CTGGATCAAC ATATTGCTAC CCAGCAGGCG CTGCGCGCTC AACGACAACA AACGCTGGAT
CAGTTAAACG AGCGACAAAA AAACCTGATC GCGTCATTGG ATAACCTGCA GCGACAACAG
CAGGCAACCC GTCTCCGGCT GGAGGATATC GACGCCTACC GGCAGCAAAA CGCCATCCAC
CAACACTGGG GCAGCCATAT TCCGCTCTGG CAGGCCCAAT TCCCCCAGCA GCAAAAATGG
CAGCAGGATC GGCAAATCCA GCAGGAAAAA GCGAACCAGC AACAGGTGCA GGCCGAATAT
CTGGAACAAC AGCGACAGAC GCTGTCGGAA CAGCAACAGG CCCAGTCCGA CGCCCAGGAG
CGCGCCCGGC AGCGTCTCGC CGAACAACAG CAGCATTATG AACAACAGGA AGCCGCGCTG
CCGATATCGG ATCTACAGCA GCAATTGGCC CGCAACGTCG CCCAACGCCA TGATCGGCAG
CAACTGGCCA CCAGTGCGGC GGTGCTGCAA CGCCTGCTCA GTCAACGCAC ACTGCTGGAA
ACGCAGCGGT TGGGTTCCCG CCAACAGTTG GAGCAATTGG AAGACGCGCA GGTACGCCAA
CGGCTGGATT ACCAGCGTCA GGCCGAACAT CTGCGCGATC TGGAAAAACG TTACGAACTG
GAACAACACA TCGTCAGCCT GGAGAGTGAG CGCCAACAAC TGCAGCTCGG TAAAGAGTGC
CCGCTGTGCG GCTCGACTCA CCACCCCGCC GTGGAGCGCT ATCAGGCGCT GCGCCCTTCC
GAAACCCAAA TCCGGTTGCA GACGCTGCGT CAGGAGGTGG AAACCCTGCG CGCTACGGTG
GTACAGACCG ATACCCAGAT CAACCTGTTG CAGCATCAGC GCCAACAGCA GCAAAACGCG
CTGGATAGCG TGCAGCAGGA TTTATCCGCG CTGGAACAGC AGTGTGTCGC GCTGAGTAAA
CACTTACTTA TCGATTTCGA TCCGCAGCAA CTGGAGCGAT TGACGCAATG GCTGACGTCC
TGCGAGGAAC AGGAACAATC CTTACAAGCG CACATCGCCG ACCGGGAACG TCAATCACGG
CAAATTCAGG AAAGTAAGGA TTTACTGACC TCAGCCAGCC AGTTACTGCA ACAGACCGAG
CAGCAGCTGG CGCTCAACCA GCAGCAACGG GATGCACTGA CGCTGGCCCA GTCGGAACTG
CAGCAAACAC TGGAGAAGAT CACACAGGAA TTGCAGCGCC TGCATCAGGC CATCAGCCAG
ACGTTGGAGG GTTTCGGCCT GTCCGCGCCC GAATTGACAC AACAGGACGA CTGGCTGCGT
CAACGTCAGT TGGAGTGGCT ACGCTGGCAG GAAAATGAGC ACGAACATCA CCAGAAACAG
CCCTATCTTT CCGCCGTCAG CGCTGACATT GAAAGCAGTC AGCGTCAACG AGAGGAAACC
AACCTGGCTA TCAAAAGTCA GCATCAGCAA CTGGCCGAAC TCCAGCGCTC GCTGGAACAG
GCTCAGCAGC AACGCTGGCA ATGGTTCGGT AACAAGGTGG TCAATGAAAC GCTGACTGAA
CTGCGTCAAC GCAGCCAACT GCTGGAGCGG GAAAATCAAC AGGCACAAAT CCAGTGGCAA
AACAGCCAAT CGCATATCAG CCACCTGAAC GGGGAGTTGG GCAGTCTGGA ACAGCAGCAC
CAACGCGCCG ACGATGCACT CAACGCCGCG ACGGAACAAT TCGGCGCCGC ACTGCGGGAA
ACCGAATTTC AGGACGAGGC GGATTTCCGC CAGGCATTAC TGGATGAGTC TACACGCCAC
CAATTAATGA TGTTGAAAGA ACGCCTCAAT CAACGCCAGC AGCAAGTGGA AAGCGTGCAT
CAACAGGCGG AAAACACGCT GGATCATCAC CTGCAGAACA AGCCGGCGTC CATGCCGGAG
GGCATCAGTC ACCACGATAT CCACCAGTTG CTGGCAGGAT TGGGGGATAT GCTGAAAAAC
GAGGTGCGGC ATCAGGGCGA GCTACGCCAA CAGCTCGCCG GCGATCAGCA ACTGCGTGAT
AAACAGCAAG CCCTGCTGAA CGAGGTAGAA CGCAGCCGCC AGCGCAGCGA AGACTGGGGT
TGCCTCAACC AATTGATCGG TTCACAGCGT GGCGACAAGT TTCGCCGGTT CGCTCAAGGG
CTCACGCTGG ATCATCTGGT GTATCTGGCC AACCGTCAGT TATCCAGACT GCACGGCCGG
TATCTGCTGC AACGCAAAGC CGCCGATACG CTGGAATTGC AAGTGGCGGA TACCTGGCAG
GCGGATGCAG TGCGCGACAC CCGCACGCTC TCCGGTGGCG AAAGCTTTCT GGTCAGTCTG
GCGCTGGCGC TGGCATTGTC CGATCTGGTT AGCAATAAAA CCCGTATCGA CTCGCTATTC
CTGGACGAAG GATTCGGCAC GCTGGACGAA GAGACGCTGG ATACCGCGCT GGACGTGCTC
GACAACCTCA ACGCCTCCGG TAAAACCATT GGCGTTATCA GCCATGTGGA AGCCATGAAG
GAACGGATTC AGGTGCAAAT TCGGGTGAGG AAACGCAACG GGCTCGGCAT CAGCCAGTTG
GATAGCGAGT ACGCAGTGAA ATAA
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| Protein sequence | MKILSLRLKN LNSLQGEWKI DFARAPFVNN SLFAITGPTG AGKTTLLDAI CLALYHQTPR
LKVSPSQNEV MTRHTAECLA EVEFEVQGTA YRAFWSQRRA HDNPEGNLQP PRVELARCAD
GKILTDRVND KLALIADITG LDFGRFTKSM MLSQGQFAAF LNADANERAE LLEELTGTDI
YGQISEQVFE KHKQSQARLE TLQAQVATIE LMSDEQRTSL EQQLAVLQQQ ENDLALQRDE
ILAHQRWYEQ LQHYQEALAT SVQQRSALDI ALIQSQPQMD RLARSEPAEK LRPLYNERER
CAREKSLLTR QITSVKQQIG QYQTALKLLK TQAEKTLSDQ KAHAEHRQQQ EDLVNERILP
LDQHIATQQA LRAQRQQTLD QLNERQKNLI ASLDNLQRQQ QATRLRLEDI DAYRQQNAIH
QHWGSHIPLW QAQFPQQQKW QQDRQIQQEK ANQQQVQAEY LEQQRQTLSE QQQAQSDAQE
RARQRLAEQQ QHYEQQEAAL PISDLQQQLA RNVAQRHDRQ QLATSAAVLQ RLLSQRTLLE
TQRLGSRQQL EQLEDAQVRQ RLDYQRQAEH LRDLEKRYEL EQHIVSLESE RQQLQLGKEC
PLCGSTHHPA VERYQALRPS ETQIRLQTLR QEVETLRATV VQTDTQINLL QHQRQQQQNA
LDSVQQDLSA LEQQCVALSK HLLIDFDPQQ LERLTQWLTS CEEQEQSLQA HIADRERQSR
QIQESKDLLT SASQLLQQTE QQLALNQQQR DALTLAQSEL QQTLEKITQE LQRLHQAISQ
TLEGFGLSAP ELTQQDDWLR QRQLEWLRWQ ENEHEHHQKQ PYLSAVSADI ESSQRQREET
NLAIKSQHQQ LAELQRSLEQ AQQQRWQWFG NKVVNETLTE LRQRSQLLER ENQQAQIQWQ
NSQSHISHLN GELGSLEQQH QRADDALNAA TEQFGAALRE TEFQDEADFR QALLDESTRH
QLMMLKERLN QRQQQVESVH QQAENTLDHH LQNKPASMPE GISHHDIHQL LAGLGDMLKN
EVRHQGELRQ QLAGDQQLRD KQQALLNEVE RSRQRSEDWG CLNQLIGSQR GDKFRRFAQG
LTLDHLVYLA NRQLSRLHGR YLLQRKAADT LELQVADTWQ ADAVRDTRTL SGGESFLVSL
ALALALSDLV SNKTRIDSLF LDEGFGTLDE ETLDTALDVL DNLNASGKTI GVISHVEAMK
ERIQVQIRVR KRNGLGISQL DSEYAVK
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