| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2910 |
|---|
| Symbol | proY |
|---|
| ID | 8089743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3392777 |
|---|
| End bp | 3394156 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644836992 |
|---|
| Product | putative proline-specific permease |
|---|
| Protein accession | YP_002988507 |
|---|
| Protein GI | 242240326 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAG AATCCAGACT CAAGCCTGGC CTTAGCACGC GACACATCCG TTTTATCGCA
TTGGGCTCCG CCATCGGTAC CGGTTTGTTC TATGGCTCCG CCAGTGCGAT TCAAATGGCC
GGGCCCAGTG TGCTACTGGC TTATCTGATT GGTGGGGTGT TCGCTTACAT CATCATGCGT
GCGCTGGGAG AGATGTCCGT CAATAATCCG CAGGCCAGCG CCTTTTCGCG CTATGCGCGG
GATTATCTCG GGCCGCTGGC GGGCTATATC ACCGGCTGGA CTTACTGTTT CGAGATGCTG
ATCGTGGCCA TCGCCGATGT GACCGCATTC GGGATTTACA TGGGGGTGTG GTTTCCCGCC
GTGCCGCATT GGGTGTGGGT GCTGAGCGTG GTGTTGATTA TCGGCGGCAT CAACCTGATG
CACGTCAAGG TGTTCGGCGA ACTGGAGTTC TGGTTCTCTT TCTTTAAGGT CGCCACCATT
ATCGTGATGA TCGTTGCCGG GATTGGCATC ATTTTCTGGG GGATCGGTAA CGGCGGCGAG
GCCACCGGCA TCCATAATCT GTGGAGCAAC GGCGGTTTCT TCAGCCATGG TGTGATGGGG
ATGATTCTGT CGCTGCAGAT GGTGATGTTC GCCTATGGCG GCGTGGAAAT AATCGGTATC
ACGGCAGGCG AGGCCAAAGA GCCGCACAAA TCCATCCCGC GCGCCATCAA CTCGGTACCC
TGGCGGATTC TGGTGTTTTA CGTGGGCACG CTGTTTGTCA TCATGTCGAT TTATCCGTGG
GATCAGGTCG GCACGAGCGG TAGCCCGTTT GTACTGACTT TCCAGCATAT GGGGATCACT
GCGGCGGCGG GCATCCTTAA CTTCGTGGTG ATTACCGCCT CGCTGTCCGC CATCAACAGC
GACGTGTTCG GTGTTGGCCG CATGTTGCAC GGCATGGCGG AGCAAGGCCA TGCACCCAAA
ATCTTTGCCC GGCTGTCGCG CGGCGGTATC CCCTGGGTGA CGGTCTTGGT CATGATGGCC
GCGCTGCTGA TTGCGGTGTA CCTCAATTAC ATTATGCCGG AAAAGGTGTT TCTGGTGATT
GCGTCGCTGG CAACGTTCGC TACTGTTTGG GTTTGGATCA TGATCCTGTG TTCGCAGATT
GCTTTCCGTC GTCAGTTGTC GGCTGAGCAG GCGGGAACAC TGGCGTTTCC ATTGCCGGGT
GGTGTAGCGA CATCCGCAGT CGGTGTGGTT TTTCTGCTGT TTATCATCGG CTTGATTGGT
TATTTCCCTG ACACGCGCAT CTCCCTGTTC GCCGGGCTGG CGTGGATGGT TATGCTGTTG
GTGAGCTATG CACTGTGGCA GCGCCGTAAA ACGGCCGGGA ACCCTGTTAC GGAGAGTTGA
|
|---|
| Protein sequence | MEQESRLKPG LSTRHIRFIA LGSAIGTGLF YGSASAIQMA GPSVLLAYLI GGVFAYIIMR
ALGEMSVNNP QASAFSRYAR DYLGPLAGYI TGWTYCFEML IVAIADVTAF GIYMGVWFPA
VPHWVWVLSV VLIIGGINLM HVKVFGELEF WFSFFKVATI IVMIVAGIGI IFWGIGNGGE
ATGIHNLWSN GGFFSHGVMG MILSLQMVMF AYGGVEIIGI TAGEAKEPHK SIPRAINSVP
WRILVFYVGT LFVIMSIYPW DQVGTSGSPF VLTFQHMGIT AAAGILNFVV ITASLSAINS
DVFGVGRMLH GMAEQGHAPK IFARLSRGGI PWVTVLVMMA ALLIAVYLNY IMPEKVFLVI
ASLATFATVW VWIMILCSQI AFRRQLSAEQ AGTLAFPLPG GVATSAVGVV FLLFIIGLIG
YFPDTRISLF AGLAWMVMLL VSYALWQRRK TAGNPVTES
|
|---|
| |