| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2893 |
|---|
| Symbol | |
|---|
| ID | 8089726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3374072 |
|---|
| End bp | 3374983 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644836975 |
|---|
| Product | geranyltranstransferase |
|---|
| Protein accession | YP_002988490 |
|---|
| Protein GI | 242240309 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT TTTTGGAGCA ACTACATGCT CACCACCAGA GAATCAACAC CACGTTGCGC
CGATTCATCT CCGCCCTGCC TTTCCAGCAG ATACCGCTGA TCGAAGCTAT GGCTTACGGC
TCGCTGCTTG GCGGCAAACG TCTGCGGCCA TTTCTGGTGT ATTCCACGGG TAGGCTATTC
AATTTGCCGC TTGAAAGCCT CGACGTACCT GCAGCCGCGG TAGAATGTAT TCACGCCTAC
TCGCTGATCC ACGACGACTT GCCGGCCATG GACGATGACG ACTTGCGCCG CGGTCAACCA
ACCTGCCATG TCAAATTCGG CGAAGCCAAC GCTATTTTGG CAGGCGATGC GTTGCAAACC
CTGGCGTTCT CCATACTGGC GGGCACCGAG ATGCCCCGCG TCAGCGATCG CGATCGGTTG
TCGATGATAG CCGAGCTTGC CTCCGCCAGC GGCGTGGGCG GTATGTGCGG CGGCCAGGCG
CTGGATCTCG AGGCGGAAGG TCGTCAGGTC GACCTCGCCG CGTTGGAACA GATCCATCGG
CACAAAACCG GCGCGTTGAT TCGGGCCTCC GTCAGGCTAG GCGCGCTGGC AGCGGGTGAA
GCCGGACGCC AGGTCATGCC GAGTCTTGAC CGTTACGCCA ACGCCATCGG ACTCGCCTTC
CAGGTGCAGG ATGATATCCT TGACGTCATT GGCGACAGCG CCACCACCGG CAAACGGCAG
GGGGCCGATC AGCAACTGGG GAAAAGCACC TATCCGGCAC TGCTCGGGCT GGCGCAGGCC
AAAGCCAAAG CGTTGGAGCT GTATCAGGAA TCCCTTGCCG CACTTGACGA ACTGGAAGCC
GCCATCGCCC ACCCGGCAGC CATATTGCCC CTTCGGTCAC TGGCGAACTA TATCGTCGAA
CGAGATAAAT AA
|
|---|
| Protein sequence | MTDFLEQLHA HHQRINTTLR RFISALPFQQ IPLIEAMAYG SLLGGKRLRP FLVYSTGRLF
NLPLESLDVP AAAVECIHAY SLIHDDLPAM DDDDLRRGQP TCHVKFGEAN AILAGDALQT
LAFSILAGTE MPRVSDRDRL SMIAELASAS GVGGMCGGQA LDLEAEGRQV DLAALEQIHR
HKTGALIRAS VRLGALAAGE AGRQVMPSLD RYANAIGLAF QVQDDILDVI GDSATTGKRQ
GADQQLGKST YPALLGLAQA KAKALELYQE SLAALDELEA AIAHPAAILP LRSLANYIVE
RDK
|
|---|
| |