Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2887 |
Symbol | |
ID | 8089720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3368316 |
End bp | 3369683 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644836969 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002988484 |
Protein GI | 242240303 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATA ATAAAATGAC GCCTGTTGAG TTAAGGGCGA CGTGGGGGCT AGGCGCCGTT TTTTCCCTGC GTATGCTGGG CATGTTTATG GTGCTCCCCG TGCTGGCCAC TTATGGTATG GCCTTACAGG GGGCCAGCGA GTCACTCATC GGCGTGGCCA TTGGCATCTA TGGTCTGATG CAGGCGATAT TTCAGATTCC TTTCGGGCTA ATGTCCGATC GGCTTGGGCG TAAACCCCTC ATCATTGGCG GTTTGGTGAT CTTTATCCTT GGTAGCGTCA TTGCCGCACT CAGCCATTCC ATTTGGGGGA TCATTCTGGG CCGGGCGTTA CAGGGAGCCG GTGCAATTTC CTCCGCCGTT ATGGCCCTGC TTTCCGATTT GACCCGCGAG CAAAATAGAA CCAAAGCCAT GGCATTTATC GGCGTTAGTT TCGGCGTCAC ATTCGCCATT GCCATGGTTA TCGGCCCGAT TGTCACTCAT GCTTTCGGGT TGCAGGCATT ATTTTGGGGA ATTGCGCTGC TTTCGCTGGT AGCCATCGCC ATCACCATTT TGGTGATTCC TTCAGCATCA GCACATGTGT TAAACCGTGA ATCAGCCATT ATCCGTAGCG GGATCCGCAA GGTTCTCGCT AACAGCCAGT TGCTGAAGCT CAACTTCGGG ATCATGTGTT TGCATATACT GTTGATGTCG AGCTTTGTCG CCCTTCCCCG GGTTATGGAG CAGGCAGGGC TCGCACCGCA AGATCAGTGG AAAGTGTATC TGGTTACTAT GCTGGTATCG TTTGTCGCCG TTGTGCCGTT TGTCATGTAT GCGGAAATCA GGCGGCGGAT GAAACAAGTA TTTATTATCT GCGTTATGCT GCTCACCGCA GCGGAGCTGG TACTGCTGCA AAGCCAGCAC TCGCTGGAAC AAACGTTGAT CGGCATTCAG ATTTTCTTCA TCGGATTCAA CGTGATGGAA GCTATTCTAC CGTCACTGAT CAGTAAAGAA GCGCCAACAG GTTATAAGGG AACCGCGATG GGCGTCTATT CGACGACTCA GTTCATCGGG GTCGCATTGG GGGGCAGCCT GGGTGGTGCG CTTTACGACC TTCAGGGCGC ATCGCTGGTT TTTAGCGCCG GAATCGGGCT GGGTTTAGTT TGGCTGCTGG TCAGTAGCAC CATGAAGGAA CCCCCCTATC TCAGCAGTCT GCGTATTACG CTGACGGATA CCGCCCTTCA GGATGCCGGG CTGCCGCAAA AACTGCAGCA ACACCCTGGC GTAGCAGATG TCGTCATTGT GCCGGACGAA GCGAGCGCTT ACATAAAAAT CGACCGCAAA AAAACCAACC GCCAGCAGTT GGAGCAGTTG GTGAGTCAAT ATAGTTAG
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Protein sequence | MNDNKMTPVE LRATWGLGAV FSLRMLGMFM VLPVLATYGM ALQGASESLI GVAIGIYGLM QAIFQIPFGL MSDRLGRKPL IIGGLVIFIL GSVIAALSHS IWGIILGRAL QGAGAISSAV MALLSDLTRE QNRTKAMAFI GVSFGVTFAI AMVIGPIVTH AFGLQALFWG IALLSLVAIA ITILVIPSAS AHVLNRESAI IRSGIRKVLA NSQLLKLNFG IMCLHILLMS SFVALPRVME QAGLAPQDQW KVYLVTMLVS FVAVVPFVMY AEIRRRMKQV FIICVMLLTA AELVLLQSQH SLEQTLIGIQ IFFIGFNVME AILPSLISKE APTGYKGTAM GVYSTTQFIG VALGGSLGGA LYDLQGASLV FSAGIGLGLV WLLVSSTMKE PPYLSSLRIT LTDTALQDAG LPQKLQQHPG VADVVIVPDE ASAYIKIDRK KTNRQQLEQL VSQYS
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