Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2851 |
Symbol | |
ID | 8089684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3329873 |
End bp | 3330604 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644836933 |
Product | outer membrane protein assembly complex subunit YfiO |
Protein accession | YP_002988448 |
Protein GI | 242240267 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGTA TGAAATACCT GGTGGCTGCT GCCACGTTGA GCCTGGCGCT GGCTGGTTGT TCCAATTCAA AAGATACAGT TCCCGATCGT CCGCCTGCAG AACTGTACGC CACCGCCCAG GAAAAATTAC AAAGCGGCAA CTTTAAAGCA GCCATCACTC AGTTGGAAGC GTTGGATAAC CGTTATCCAT TCGGCCCATA CTCTCAGCAA GTACAGTTGG ATCTGATCTA CGCTTACTAT AAATCCGCCG ATCTGTCTCT AGCTCAGGCG TCAATAGATC GTTTTATTCG ACTGAACCCG ACACATCCTA ACGTAGATTA CGTGCTGTAT ATGCGTGGAT TGACCAACAT GGCGCTGGAT GATAGCGCAC TGCAGGGCTT CTTTGGTGTC GATCGCTCGG ATCGGGATCC TCAATATGCT CGCTCAGCCT TCAAAGCGTT CAGTCAATTG GTTCAGGAAT ATCCGCGCAG CCAGTACGCA ACCGATGCCA GCAAACGTCT GGCTTACATT AAGGAACGTT TGGCCAAATA TGAGTTCTCC GTTGCGCAAT ACTACACGAA ACGTGGGGCT TATGTGGCGG TAGTGAATCG GGTAGAGCAA ATGTTGAAGG ATTATCCTGA CACGCAGGCC ACCAGAAAAG CCCTGCCGCT GATGGAGAAC GCCTACCGGG AGTTGCAGCT AGTCGGGGAA GCAGACAAAG TAGCGAAAAT CATCGCCGCG AACCCTGCAT AA
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Protein sequence | MTRMKYLVAA ATLSLALAGC SNSKDTVPDR PPAELYATAQ EKLQSGNFKA AITQLEALDN RYPFGPYSQQ VQLDLIYAYY KSADLSLAQA SIDRFIRLNP THPNVDYVLY MRGLTNMALD DSALQGFFGV DRSDRDPQYA RSAFKAFSQL VQEYPRSQYA TDASKRLAYI KERLAKYEFS VAQYYTKRGA YVAVVNRVEQ MLKDYPDTQA TRKALPLMEN AYRELQLVGE ADKVAKIIAA NPA
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