Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2816 |
Symbol | |
ID | 8089643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3292517 |
End bp | 3294955 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644836894 |
Product | ATP-dependent RNA helicase HrpB |
Protein accession | YP_002988415 |
Protein GI | 242240234 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTTAC CCCCCGTCAG TGCGGTGCTG GATGACGTCG TTCAATCGCT GCGTTCTGCG CCGCAGGTAC TGCTGCACGC GCCGACCGGC GCAGGAAAAT CGACCTGGTT GCCGCTGCAA CTGCTGCTGA AGGGCGGTTT TCCCGGTCGT ATCGTGATGC TGGAGCCGCG GCGGCTGGCG GCGAAAAGCG TGGCTTGGCG GCTGGCGGAG CAACTGGGGG AAGCGCCCGG TCGCACCGTG GGATATCGCA TGCGCGCGGA AAGCCGCATT AGCGAGCAGA CGCGCCTGGA GGTGGTAACG GAAGGCATTC TGACGCGCAT GCTACAGCGG GATCCGGCGC TGGAGGGCGT ATCGCTGGTC ATCCTGGATG AGTTTCATGA ACGCAGCCTA CAGGCGGATC TGGCGCTGGC GCTGTTGCTG GATGTACAGG CAGGGTTACG TGACGATCTG CGTCTGCTGA TTATGTCCGC CACGTTGGAT AACGATCGCC TCTCTTCTTT ATTACCGCAG GCGCGAGCGG TGACATCAGC GGGCCGTTCC TGGCCGGTGA CTCGGCAATA TCACGCAATG GGGTCGCAAG AGCGGCTGGA GGACGCGCTG TCACGGTTGA TTTTACGGCT GTTGCAGCAG GAAACCGGAT CGCAACTGGT GTTTCTGCCC GGCGTCGGGG AGATAAAGCG CCTGCAGGCT CTGTTGGAAG AAAACGTGCC GGAGGAGATT GCGATCTGCC CGTTGTACGG CGCACTTACG CTGGCTGAGC AGCAAAAGGC GATCCTGCCG GCAGAGCCCG GCCGGCGCAA AGTCGTGCTG GCGACCAATA TCGCTGAAAC CAGTCTGACG ATTGAAGGGA TCCGGGTGGT TGTGGATAGC GGTCTGGAGC GCGTGGCGCT GTTTGACGTT AAAACCGGGC TGACCCGGTT GGTCACACAG CGTATCAGTC AGGCCTCCAT GACGCAGCGC GCCGGCCGTG CCGGTCGCCT GGAGCCCGGC GTGTGCTGGC ATCTGTTTGC CCGGGAGCAG GCGGAGCGAG CGGCGGCGCA AAGCGAACCT GAAATCCTGC ACAGCGATCT GTCCGGTTTC TGGCTGGAGT TGCTGCAATG GGGATGTGCG GACGTCGGGC AATTGACCTG GTTGGATACT CCGCCGACGC CTGCCTTGCT GGCGGCGCAG CAGTTGTTGC GAGTGCTGGC GATTTGCGAT CCCGGGCAGC GCTTGACACC GGATGGCAGG CAAATGGCGG CGCTGGGGTG CGATCCCCGT CTGGCGGCGA TGTTGCACTA TGCCGGCGAC AATGACGATG CGCTGGCGAC GGCCGCGTTG CTGGCTGCGA TAATCGAGGA GCCGCCCCGC AGCGGCTCGC CGTCGCTGTC CGACTGGCTG CACCGCCCGA TGGCGCACTG GCAGAAACGG GCGCAGCAGC TGGCGCGGCG CGTCGGACAT CGTCAAGGGC GATGTAATGA AGCGTTGGCG GCGGAACTGC TGGCCGTCGG TTTTCCCGAT CGGGTGGCGC AACAGCGTTC CCGGGACGGT CGTTACCTGC TGGCTAACGG CACGGGCGCC AGCCTGCCGC CGGAGGAGGC GTTATCCGCC GCCGAATGGT TGATTGCGCC GGCGTTGATG CAGAGCCCGA ACAGCGCCGA TGCGCGGATT CAACTGGCGT TGGCGGTGGA TATCGAGCGG CTGACGCAAC ATCATCCGGC GTTGGTGACA CAGCAGAATC AGGTGCACTG GGATGCAGAA AAAGGTACCC TGCGCGCCAG CCGACGCACC CGACTCGGCG AATTAACGTT GCGCGTTCAG CCGCTGGCTA AACCTTCCGA TGAGGAATGG CAACAGGCCA TGCTGGGATG GATTCGTGAA CAGGGACTGA GCGTGTTGAA CTGGAGCGAT AGCGCGACGC AACTGCGCCA GCGACTGCTC TGCGCCAGGC TCTGGTTGCC GGAGGTGGCC TGGCCGTTGG CGGATGATGA CGCGCTGTTG GCGTCGCTGG ATACCTGGTT GTCGCCGTCG TTGTCCGGTG TGCGCGATCG CCGGGCGCTG GAGCAGGTCG ATCTGACCGA CGCGCTATTG CGTCTGCTGG ACTGGCCGTT GCGGCAACGC CTGGATAGCG CTTTACCCAG CCATTACACT GTGCCGGGCG GCAGTCGTTT GCCGATTCGT TATCAGTGGG AACAGCCGCC GGTGCTGGCG GTGCGTCTGC AGGAAATGTT CGGTGAGCGG CAAAGCCCAT CGGTGGCGGA AGGGCGCGTG GTGCTGGTGC TGGAATTGTT ATCGCCTGCG CAGCGGCCAT TGCAGATTAC CCGCGATCTG GCTGCGTTCT GGCAGGGCGC CTATCGTGAA GTACAAAAAG AGATGAAAGG GCGTTACCCG AAGCACGTCT GGCCGGATGA TCCGGCGAAC GCCATACCGA CCAGACGAAC CAAAAAGTAT CAGCAATAG
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Protein sequence | MNLPPVSAVL DDVVQSLRSA PQVLLHAPTG AGKSTWLPLQ LLLKGGFPGR IVMLEPRRLA AKSVAWRLAE QLGEAPGRTV GYRMRAESRI SEQTRLEVVT EGILTRMLQR DPALEGVSLV ILDEFHERSL QADLALALLL DVQAGLRDDL RLLIMSATLD NDRLSSLLPQ ARAVTSAGRS WPVTRQYHAM GSQERLEDAL SRLILRLLQQ ETGSQLVFLP GVGEIKRLQA LLEENVPEEI AICPLYGALT LAEQQKAILP AEPGRRKVVL ATNIAETSLT IEGIRVVVDS GLERVALFDV KTGLTRLVTQ RISQASMTQR AGRAGRLEPG VCWHLFAREQ AERAAAQSEP EILHSDLSGF WLELLQWGCA DVGQLTWLDT PPTPALLAAQ QLLRVLAICD PGQRLTPDGR QMAALGCDPR LAAMLHYAGD NDDALATAAL LAAIIEEPPR SGSPSLSDWL HRPMAHWQKR AQQLARRVGH RQGRCNEALA AELLAVGFPD RVAQQRSRDG RYLLANGTGA SLPPEEALSA AEWLIAPALM QSPNSADARI QLALAVDIER LTQHHPALVT QQNQVHWDAE KGTLRASRRT RLGELTLRVQ PLAKPSDEEW QQAMLGWIRE QGLSVLNWSD SATQLRQRLL CARLWLPEVA WPLADDDALL ASLDTWLSPS LSGVRDRRAL EQVDLTDALL RLLDWPLRQR LDSALPSHYT VPGGSRLPIR YQWEQPPVLA VRLQEMFGER QSPSVAEGRV VLVLELLSPA QRPLQITRDL AAFWQGAYRE VQKEMKGRYP KHVWPDDPAN AIPTRRTKKY QQ
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